RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
RBFOX1-208ENST00000547372 HRCP23327 699 aa20.19■□□□□ 0.82
RBFOX1-208ENST00000547372 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.82
RBFOX1-208ENST00000547372 PPARGC1BQ86YN6 1023 aaKnown RBP20.14■□□□□ 0.81
RBFOX1-208ENST00000547372 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
RBFOX1-208ENST00000547372 SUPT5HO00267 1087 aaKnown RBP19.65■□□□□ 0.74
RBFOX1-208ENST00000547372 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
RBFOX1-208ENST00000547372 MYT1Q01538 1121 aa19.44■□□□□ 0.7
RBFOX1-208ENST00000547372 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
RBFOX1-208ENST00000547372 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
RBFOX1-208ENST00000547372 DCAF8L2P0C7V8 631 aa19.05■□□□□ 0.64
RBFOX1-208ENST00000547372 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
RBFOX1-208ENST00000547372 GTF3C3Q9Y5Q9 886 aa18.91■□□□□ 0.62
RBFOX1-208ENST00000547372 NEUROD1Q13562 356 aa18.87■□□□□ 0.61
RBFOX1-208ENST00000547372 LOC105371045A0A1W2PR82 267 aa18.85■□□□□ 0.61
RBFOX1-208ENST00000547372 ACIN1Q9UKV3 1341 aaKnown RBP18.83■□□□□ 0.6
RBFOX1-208ENST00000547372 TRIM26Q12899 539 aaPredicted RBP18.8■□□□□ 0.6
RBFOX1-208ENST00000547372 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
RBFOX1-208ENST00000547372 ZEB1P37275 1124 aaPredicted RBP18.73■□□□□ 0.59
RBFOX1-208ENST00000547372 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
RBFOX1-208ENST00000547372 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.57
RBFOX1-208ENST00000547372 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
RBFOX1-208ENST00000547372 YTHDC1Q96MU7 727 aaKnown RBP18.53■□□□□ 0.56
RBFOX1-208ENST00000547372 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
RBFOX1-208ENST00000547372 FAM9AQ8IZU1 332 aaPredicted RBP18.39■□□□□ 0.53
RBFOX1-208ENST00000547372 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-208ENST00000547372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-208ENST00000547372 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.52
RBFOX1-208ENST00000547372 TTBK1Q5TCY1 1321 aaPredicted RBP18.21■□□□□ 0.51
RBFOX1-208ENST00000547372 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
RBFOX1-208ENST00000547372 ANP32EQ9BTT0 268 aa18.03■□□□□ 0.48
RBFOX1-208ENST00000547372 PRKCSHP14314 528 aaPredicted RBP18.01■□□□□ 0.47
RBFOX1-208ENST00000547372 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
RBFOX1-208ENST00000547372 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
RBFOX1-208ENST00000547372 MIER1Q8N108 512 aa17.85■□□□□ 0.45
RBFOX1-208ENST00000547372 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.43
RBFOX1-208ENST00000547372 TSHZ2Q9NRE2 1034 aa17.75■□□□□ 0.43
RBFOX1-208ENST00000547372 BCANQ96GW7 911 aa17.71■□□□□ 0.43
RBFOX1-208ENST00000547372 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-208ENST00000547372 ERICH6Q7L0X2 663 aa17.52■□□□□ 0.39
RBFOX1-208ENST00000547372 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-208ENST00000547372 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
RBFOX1-208ENST00000547372 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-208ENST00000547372 ITGAEP38570 1179 aa17.36■□□□□ 0.37
RBFOX1-208ENST00000547372 RBM19Q9Y4C8 960 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-208ENST00000547372 FKBP8Q14318 412 aa17.34■□□□□ 0.37
RBFOX1-208ENST00000547372 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
RBFOX1-208ENST00000547372 UBTFP17480 764 aaKnown RBP17.31■□□□□ 0.36
RBFOX1-208ENST00000547372 APLP2Q06481 763 aa17.27■□□□□ 0.35
RBFOX1-208ENST00000547372 CCDC136Q96JN2 1154 aa17.24■□□□□ 0.35
RBFOX1-208ENST00000547372 RSF1Q96T23 1441 aaPredicted RBP17.24■□□□□ 0.35
RBFOX1-208ENST00000547372 ABCC9O60706 1549 aa17.2■□□□□ 0.34
RBFOX1-208ENST00000547372 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
RBFOX1-208ENST00000547372 NEFLP07196 543 aa17.19■□□□□ 0.34
RBFOX1-208ENST00000547372 MSH5O43196 834 aa17.18■□□□□ 0.34
RBFOX1-208ENST00000547372 DEKP35659 375 aaKnown RBP17.16■□□□□ 0.34
RBFOX1-208ENST00000547372 KCNH8Q96L42 1107 aa17.14■□□□□ 0.34
RBFOX1-208ENST00000547372 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
RBFOX1-208ENST00000547372 NBR1Q14596 966 aa17.1■□□□□ 0.33
RBFOX1-208ENST00000547372 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
RBFOX1-208ENST00000547372 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
RBFOX1-208ENST00000547372 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-208ENST00000547372 CEP162Q5TB80 1403 aa17.01■□□□□ 0.31
RBFOX1-208ENST00000547372 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
RBFOX1-208ENST00000547372 IRX6P78412 446 aaPredicted RBP16.96■□□□□ 0.31
RBFOX1-208ENST00000547372 CDK11AQ9UQ88 783 aaPredicted RBP16.93■□□□□ 0.3
RBFOX1-208ENST00000547372 EIF5BO60841 1220 aaKnown RBP16.9■□□□□ 0.3
RBFOX1-208ENST00000547372 TNIKQ9UKE5 1360 aa16.84■□□□□ 0.29
RBFOX1-208ENST00000547372 IL27Q8NEV9 243 aa16.84■□□□□ 0.29
RBFOX1-208ENST00000547372 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
RBFOX1-208ENST00000547372 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
RBFOX1-208ENST00000547372 DDX10Q13206 875 aaKnown RBP16.81■□□□□ 0.28
RBFOX1-208ENST00000547372 RTL5Q5HYW3 569 aaPredicted RBP16.79■□□□□ 0.28
RBFOX1-208ENST00000547372 FANCIQ9NVI1 1328 aa16.77■□□□□ 0.28
RBFOX1-208ENST00000547372 HIRIP3Q9BW71 556 aaPredicted RBP16.71■□□□□ 0.27
RBFOX1-208ENST00000547372 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.26
RBFOX1-208ENST00000547372 SOGA1O94964 1423 aa16.7■□□□□ 0.26
RBFOX1-208ENST00000547372 UBE2Q2Q8WVN8 375 aa16.69■□□□□ 0.26
RBFOX1-208ENST00000547372 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
RBFOX1-208ENST00000547372 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
RBFOX1-208ENST00000547372 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
RBFOX1-208ENST00000547372 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
RBFOX1-208ENST00000547372 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
RBFOX1-208ENST00000547372 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
RBFOX1-208ENST00000547372 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
RBFOX1-208ENST00000547372 ATP1B4Q9UN42 357 aaPredicted RBP16.63■□□□□ 0.25
RBFOX1-208ENST00000547372 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
RBFOX1-208ENST00000547372 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
RBFOX1-208ENST00000547372 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
RBFOX1-208ENST00000547372 WIZO95785 1651 aa16.58■□□□□ 0.24
RBFOX1-208ENST00000547372 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.24
RBFOX1-208ENST00000547372 RUSC2Q8N2Y8 1516 aa16.56■□□□□ 0.24
RBFOX1-208ENST00000547372 ANP32CO43423 234 aa16.56■□□□□ 0.24
RBFOX1-208ENST00000547372 EEA1Q15075 1411 aa16.55■□□□□ 0.24
RBFOX1-208ENST00000547372 CLIP1P30622 1438 aa16.52■□□□□ 0.24
RBFOX1-208ENST00000547372 EIF4G1Q04637 1599 aaKnown RBP16.52■□□□□ 0.24
RBFOX1-208ENST00000547372 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.23
RBFOX1-208ENST00000547372 TIMELESSQ9UNS1 1208 aa16.51■□□□□ 0.23
RBFOX1-208ENST00000547372 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
RBFOX1-208ENST00000547372 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms