RNA–Protein interactions for RNA: ENST00000263125.9

PRKCQ-201, Transcript of protein kinase C theta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCQ, Length 3,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-201ENST00000263125 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
PRKCQ-201ENST00000263125 HRCP23327 699 aa20.72■□□□□ 0.91
PRKCQ-201ENST00000263125 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
PRKCQ-201ENST00000263125 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
PRKCQ-201ENST00000263125 SHROOM4Q9ULL8 1493 aa20.34■□□□□ 0.85
PRKCQ-201ENST00000263125 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
PRKCQ-201ENST00000263125 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
PRKCQ-201ENST00000263125 PELP1Q8IZL8 1130 aaKnown RBP19.99■□□□□ 0.79
PRKCQ-201ENST00000263125 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
PRKCQ-201ENST00000263125 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
PRKCQ-201ENST00000263125 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
PRKCQ-201ENST00000263125 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
PRKCQ-201ENST00000263125 TRIM26Q12899 539 aaPredicted RBP19.47■□□□□ 0.71
PRKCQ-201ENST00000263125 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
PRKCQ-201ENST00000263125 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
PRKCQ-201ENST00000263125 NEUROD1Q13562 356 aa19.21■□□□□ 0.67
PRKCQ-201ENST00000263125 ACIN1Q9UKV3 1341 aaKnown RBP19.16■□□□□ 0.66
PRKCQ-201ENST00000263125 MYT1Q01538 1121 aa19.15■□□□□ 0.66
PRKCQ-201ENST00000263125 GTF3C3Q9Y5Q9 886 aa19.11■□□□□ 0.65
PRKCQ-201ENST00000263125 ZCCHC6Q5VYS8 1495 aaKnown RBP19.04■□□□□ 0.64
PRKCQ-201ENST00000263125 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
PRKCQ-201ENST00000263125 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
PRKCQ-201ENST00000263125 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.61
PRKCQ-201ENST00000263125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.83■□□□□ 0.6
PRKCQ-201ENST00000263125 CENPBP07199 599 aaPredicted RBP18.79■□□□□ 0.6
PRKCQ-201ENST00000263125 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
PRKCQ-201ENST00000263125 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
PRKCQ-201ENST00000263125 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
PRKCQ-201ENST00000263125 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
PRKCQ-201ENST00000263125 TTBK1Q5TCY1 1321 aaPredicted RBP18.47■□□□□ 0.55
PRKCQ-201ENST00000263125 MIER1Q8N108 512 aa18.35■□□□□ 0.53
PRKCQ-201ENST00000263125 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
PRKCQ-201ENST00000263125 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
PRKCQ-201ENST00000263125 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
PRKCQ-201ENST00000263125 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
PRKCQ-201ENST00000263125 ABCC9O60706 1549 aa18.13■□□□□ 0.49
PRKCQ-201ENST00000263125 ANP32EQ9BTT0 268 aa18.12■□□□□ 0.49
PRKCQ-201ENST00000263125 SUPT16HQ9Y5B9 1047 aaKnown RBP18.1■□□□□ 0.49
PRKCQ-201ENST00000263125 TSHZ2Q9NRE2 1034 aa18.08■□□□□ 0.48
PRKCQ-201ENST00000263125 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
PRKCQ-201ENST00000263125 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
PRKCQ-201ENST00000263125 BCANQ96GW7 911 aa17.85■□□□□ 0.45
PRKCQ-201ENST00000263125 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
PRKCQ-201ENST00000263125 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
PRKCQ-201ENST00000263125 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
PRKCQ-201ENST00000263125 KCNH8Q96L42 1107 aa17.72■□□□□ 0.43
PRKCQ-201ENST00000263125 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
PRKCQ-201ENST00000263125 UBTFP17480 764 aaKnown RBP17.67■□□□□ 0.42
PRKCQ-201ENST00000263125 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
PRKCQ-201ENST00000263125 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
PRKCQ-201ENST00000263125 PRKCSHP14314 528 aaPredicted RBP17.63■□□□□ 0.41
PRKCQ-201ENST00000263125 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
PRKCQ-201ENST00000263125 RBM19Q9Y4C8 960 aaKnown RBP17.62■□□□□ 0.41
PRKCQ-201ENST00000263125 SOGA1O94964 1423 aa17.62■□□□□ 0.41
PRKCQ-201ENST00000263125 FKBP8Q14318 412 aa17.62■□□□□ 0.41
PRKCQ-201ENST00000263125 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
PRKCQ-201ENST00000263125 TNIKQ9UKE5 1360 aa17.58■□□□□ 0.41
PRKCQ-201ENST00000263125 ITGAEP38570 1179 aa17.58■□□□□ 0.4
PRKCQ-201ENST00000263125 WIZO95785 1651 aa17.57■□□□□ 0.4
PRKCQ-201ENST00000263125 MSH5O43196 834 aa17.55■□□□□ 0.4
PRKCQ-201ENST00000263125 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
PRKCQ-201ENST00000263125 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
PRKCQ-201ENST00000263125 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.39
PRKCQ-201ENST00000263125 DHX57Q6P158 1386 aaKnown RBP17.41■□□□□ 0.38
PRKCQ-201ENST00000263125 TRIM52Q96A61 297 aa17.35■□□□□ 0.37
PRKCQ-201ENST00000263125 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
PRKCQ-201ENST00000263125 NEFLP07196 543 aa17.32■□□□□ 0.36
PRKCQ-201ENST00000263125 APLP2Q06481 763 aa17.32■□□□□ 0.36
PRKCQ-201ENST00000263125 CLIP1P30622 1438 aa17.3■□□□□ 0.36
PRKCQ-201ENST00000263125 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
PRKCQ-201ENST00000263125 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
PRKCQ-201ENST00000263125 ERICH6Q7L0X2 663 aa17.27■□□□□ 0.35
PRKCQ-201ENST00000263125 IRX6P78412 446 aaPredicted RBP17.25■□□□□ 0.35
PRKCQ-201ENST00000263125 VPS8Q8N3P4 1428 aa17.24■□□□□ 0.35
PRKCQ-201ENST00000263125 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
PRKCQ-201ENST00000263125 NACADO15069 1562 aa17.22■□□□□ 0.35
PRKCQ-201ENST00000263125 DEKP35659 375 aaKnown RBP17.22■□□□□ 0.35
PRKCQ-201ENST00000263125 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
PRKCQ-201ENST00000263125 EEA1Q15075 1411 aa17.2■□□□□ 0.34
PRKCQ-201ENST00000263125 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
PRKCQ-201ENST00000263125 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
PRKCQ-201ENST00000263125 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
PRKCQ-201ENST00000263125 NBR1Q14596 966 aa17.1■□□□□ 0.33
PRKCQ-201ENST00000263125 CDK11AQ9UQ88 783 aaPredicted RBP17.1■□□□□ 0.33
PRKCQ-201ENST00000263125 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
PRKCQ-201ENST00000263125 KIF21BO75037 1637 aa17.08■□□□□ 0.32
PRKCQ-201ENST00000263125 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
PRKCQ-201ENST00000263125 PPP1R15AO75807 674 aaPredicted RBP17.07■□□□□ 0.32
PRKCQ-201ENST00000263125 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
PRKCQ-201ENST00000263125 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
PRKCQ-201ENST00000263125 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
PRKCQ-201ENST00000263125 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
PRKCQ-201ENST00000263125 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
PRKCQ-201ENST00000263125 ANP32CO43423 234 aa17■□□□□ 0.31
PRKCQ-201ENST00000263125 PAK3O75914 559 aaPredicted RBP17■□□□□ 0.31
PRKCQ-201ENST00000263125 MAPKBP1O60336 1514 aa16.98■□□□□ 0.31
PRKCQ-201ENST00000263125 HNRNPUQ00839 825 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRKCQ-201ENST00000263125 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
PRKCQ-201ENST00000263125 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
PRKCQ-201ENST00000263125 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms