Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC004899.1-201ENST00000424687 1714 ntBASIC14.78□□□□□ -0.04
PCDHGC4Q9Y5F7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 AC136759.1-202ENST00000530858 2194 ntBASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 AL009178.2-201ENST00000597278 2719 ntBASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.77□□□□□ -0.04
PCDHGC4Q9Y5F7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 RPL18P13-201ENST00000478088 569 ntBASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 AC005324.6-201ENST00000587972 613 ntBASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 BNIP3P13-201ENST00000599968 566 ntBASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 AL023803.2-201ENST00000620080 638 ntBASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 AC012617.1-204ENST00000586340 2305 ntBASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGC4Q9Y5F7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 AC126915.1-201ENST00000522847 1038 ntBASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 AL160314.3-201ENST00000556041 767 ntBASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 SORD2P-201ENST00000558556 1069 ntBASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 AL022328.3-201ENST00000607943 679 ntBASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGC4Q9Y5F7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms