Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 AC079112.1-201ENST00000454972 939 ntBASIC15.17■□□□□ 0.02
TPGS2Q68CL5 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 BRD7P5-201ENST00000299197 1822 ntBASIC15.17■□□□□ 0.02
TPGS2Q68CL5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.17■□□□□ 0.02
TPGS2Q68CL5 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPGS2Q68CL5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 FGD5P1-202ENST00000614866 2498 ntBASIC15.16■□□□□ 0.02
TPGS2Q68CL5 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPGS2Q68CL5 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 HLA-DMA-203ENST00000395305 777 ntBASIC15.15■□□□□ 0.02
TPGS2Q68CL5 OR8T1P-201ENST00000421347 918 ntBASIC15.15■□□□□ 0.02
TPGS2Q68CL5 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.15■□□□□ 0.02
TPGS2Q68CL5 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms