Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDK3Q00526 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 AC007686.3-201ENST00000619017 3487 ntBASIC14.34□□□□□ -0.11
CDK3Q00526 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.34□□□□□ -0.11
CDK3Q00526 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CDK3Q00526 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.34□□□□□ -0.11
CDK3Q00526 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.34□□□□□ -0.11
CDK3Q00526 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.34□□□□□ -0.11
CDK3Q00526 AC006335.1-201ENST00000445200 547 ntBASIC14.34□□□□□ -0.11
CDK3Q00526 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.34□□□□□ -0.11
CDK3Q00526 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.34□□□□□ -0.11
CDK3Q00526 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.34□□□□□ -0.11
CDK3Q00526 CHMP4BP1-201ENST00000556017 588 ntBASIC14.34□□□□□ -0.11
CDK3Q00526 RN7SL574P-201ENST00000581512 297 ntBASIC14.34□□□□□ -0.11
CDK3Q00526 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.34□□□□□ -0.11
CDK3Q00526 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.34□□□□□ -0.11
CDK3Q00526 AC097724.1-201ENST00000609581 426 ntBASIC14.34□□□□□ -0.11
CDK3Q00526 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.34□□□□□ -0.11
CDK3Q00526 LINC02228-204ENST00000642115 2962 ntBASIC14.34□□□□□ -0.11
CDK3Q00526 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.34□□□□□ -0.11
CDK3Q00526 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.34□□□□□ -0.11
CDK3Q00526 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDK3Q00526 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CDK3Q00526 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDK3Q00526 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDK3Q00526 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDK3Q00526 AC140479.7-201ENST00000636301 2332 ntBASIC14.33□□□□□ -0.11
CDK3Q00526 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDK3Q00526 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDK3Q00526 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.33□□□□□ -0.11
CDK3Q00526 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CDK3Q00526 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CDK3Q00526 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDK3Q00526 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDK3Q00526 AC106881.1-201ENST00000605849 3329 ntBASIC14.33□□□□□ -0.11
CDK3Q00526 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CDK3Q00526 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
CDK3Q00526 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.33□□□□□ -0.11
CDK3Q00526 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.33□□□□□ -0.12
CDK3Q00526 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.33□□□□□ -0.12
CDK3Q00526 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.33□□□□□ -0.12
CDK3Q00526 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDK3Q00526 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDK3Q00526 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.33□□□□□ -0.12
CDK3Q00526 TSPY25P-201ENST00000429463 745 ntBASIC14.33□□□□□ -0.12
CDK3Q00526 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.33□□□□□ -0.12
CDK3Q00526 AL161932.2-201ENST00000435436 679 ntBASIC14.33□□□□□ -0.12
CDK3Q00526 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.33□□□□□ -0.12
CDK3Q00526 AL606495.2-201ENST00000605867 535 ntBASIC14.33□□□□□ -0.12
CDK3Q00526 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.33□□□□□ -0.12
CDK3Q00526 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDK3Q00526 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CDK3Q00526 LINC01165-201ENST00000445190 1623 ntBASIC14.33□□□□□ -0.12
CDK3Q00526 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDK3Q00526 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.33□□□□□ -0.12
CDK3Q00526 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms