Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 AC139712.1-201ENST00000378256 1875 ntBASIC13.12□□□□□ -0.31
ACTA1P68133 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ACTA1P68133 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
ACTA1P68133 KHSRPP1-201ENST00000427983 1768 ntBASIC13.12□□□□□ -0.31
ACTA1P68133 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ACTA1P68133 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ACTA1P68133 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ACTA1P68133 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ACTA1P68133 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ACTA1P68133 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ACTA1P68133 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ACTA1P68133 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.11□□□□□ -0.31
ACTA1P68133 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.11□□□□□ -0.31
ACTA1P68133 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
ACTA1P68133 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
ACTA1P68133 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 AL591122.2-201ENST00000624125 1853 ntBASIC13.11□□□□□ -0.31
ACTA1P68133 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.11□□□□□ -0.31
ACTA1P68133 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ACTA1P68133 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ACTA1P68133 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.11□□□□□ -0.31
ACTA1P68133 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.11□□□□□ -0.31
ACTA1P68133 AC104596.2-201ENST00000512793 793 ntBASIC13.11□□□□□ -0.31
ACTA1P68133 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.11□□□□□ -0.31
ACTA1P68133 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.11□□□□□ -0.31
ACTA1P68133 AC104794.3-201ENST00000566840 1248 ntBASIC13.11□□□□□ -0.31
ACTA1P68133 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.11□□□□□ -0.31
ACTA1P68133 AC138761.1-201ENST00000584393 385 ntBASIC13.11□□□□□ -0.31
ACTA1P68133 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ACTA1P68133 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ACTA1P68133 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ACTA1P68133 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.11□□□□□ -0.31
ACTA1P68133 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.11□□□□□ -0.31
ACTA1P68133 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ACTA1P68133 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.11□□□□□ -0.31
ACTA1P68133 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.11□□□□□ -0.31
ACTA1P68133 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ACTA1P68133 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.11□□□□□ -0.31
ACTA1P68133 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ACTA1P68133 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ACTA1P68133 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 FAM90A12P-201ENST00000519497 2375 ntBASIC13.1□□□□□ -0.31
ACTA1P68133 FAM90A24P-201ENST00000520792 2369 ntBASIC13.1□□□□□ -0.31
ACTA1P68133 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.1□□□□□ -0.31
ACTA1P68133 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.1□□□□□ -0.31
ACTA1P68133 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.1□□□□□ -0.31
ACTA1P68133 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ACTA1P68133 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ACTA1P68133 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ACTA1P68133 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.1□□□□□ -0.31
ACTA1P68133 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ACTA1P68133 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.1□□□□□ -0.31
ACTA1P68133 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ACTA1P68133 MIR943-201ENST00000401286 94 ntBASIC13.1□□□□□ -0.31
ACTA1P68133 ACTBP8-201ENST00000403258 1108 ntBASIC13.1□□□□□ -0.31
ACTA1P68133 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.1□□□□□ -0.31
ACTA1P68133 SOCS2P1-201ENST00000417727 557 ntBASIC13.1□□□□□ -0.31
ACTA1P68133 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.1□□□□□ -0.31
ACTA1P68133 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.1□□□□□ -0.31
ACTA1P68133 AC008738.7-201ENST00000609744 511 ntBASIC13.1□□□□□ -0.31
ACTA1P68133 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms