Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AL136317.3-201ENST00000618497 906 ntBASIC9.97□□□□□ -0.81
CXCL5P42830 AC073592.8-201ENST00000624126 511 ntBASIC9.97□□□□□ -0.81
CXCL5P42830 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC9.97□□□□□ -0.81
CXCL5P42830 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 AL157414.3-201ENST00000624276 1954 ntBASIC9.97□□□□□ -0.81
CXCL5P42830 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
CXCL5P42830 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CXCL5P42830 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
CXCL5P42830 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 AC106818.1-201ENST00000623223 3242 ntBASIC9.97□□□□□ -0.81
CXCL5P42830 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
CXCL5P42830 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CXCL5P42830 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
CXCL5P42830 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CXCL5P42830 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CXCL5P42830 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC9.96□□□□□ -0.81
CXCL5P42830 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.96□□□□□ -0.81
CXCL5P42830 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC9.96□□□□□ -0.81
CXCL5P42830 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC9.96□□□□□ -0.81
CXCL5P42830 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.81
CXCL5P42830 TP73-207ENST00000378290 1831 ntTSL 2 BASIC9.96□□□□□ -0.81
CXCL5P42830 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CXCL5P42830 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
CXCL5P42830 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CXCL5P42830 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CXCL5P42830 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC9.96□□□□□ -0.82
CXCL5P42830 HLA-K-203ENST00000430151 1046 ntBASIC9.96□□□□□ -0.82
CXCL5P42830 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC9.96□□□□□ -0.82
CXCL5P42830 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC9.96□□□□□ -0.82
CXCL5P42830 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC9.96□□□□□ -0.82
CXCL5P42830 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC9.96□□□□□ -0.82
CXCL5P42830 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC9.96□□□□□ -0.82
CXCL5P42830 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC9.96□□□□□ -0.82
CXCL5P42830 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC9.96□□□□□ -0.82
CXCL5P42830 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC9.96□□□□□ -0.82
CXCL5P42830 AL596442.2-201ENST00000610240 980 ntBASIC9.96□□□□□ -0.82
CXCL5P42830 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 SPDYE12P-201ENST00000618416 771 ntBASIC9.96□□□□□ -0.82
CXCL5P42830 HOTTIP_1.1-201ENST00000620415 57 ntBASIC9.96□□□□□ -0.82
CXCL5P42830 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
CXCL5P42830 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC9.96□□□□□ -0.82
CXCL5P42830 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC9.96□□□□□ -0.82
CXCL5P42830 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
CXCL5P42830 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC9.96□□□□□ -0.82
CXCL5P42830 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
CXCL5P42830 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
CXCL5P42830 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
CXCL5P42830 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
CXCL5P42830 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CXCL5P42830 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 AC134407.3-201ENST00000624035 2139 ntBASIC9.95□□□□□ -0.82
CXCL5P42830 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 API5-203ENST00000455725 2257 ntTSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 AOC4P-203ENST00000566825 2289 ntBASIC9.95□□□□□ -0.82
CXCL5P42830 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms