Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.75□□□□□ -0.37
UPK1BO75841 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 AC004840.1-201ENST00000636359 365 ntBASIC12.75□□□□□ -0.37
UPK1BO75841 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
UPK1BO75841 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UPK1BO75841 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK1BO75841 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK1BO75841 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
UPK1BO75841 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK1BO75841 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK1BO75841 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK1BO75841 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 AC104076.2-201ENST00000448912 469 ntBASIC12.74□□□□□ -0.37
UPK1BO75841 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK1BO75841 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK1BO75841 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK1BO75841 MIR4751-201ENST00000578027 74 ntBASIC12.74□□□□□ -0.37
UPK1BO75841 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK1BO75841 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
UPK1BO75841 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK1BO75841 AL121956.5-201ENST00000625261 221 ntBASIC12.74□□□□□ -0.37
UPK1BO75841 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
UPK1BO75841 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
UPK1BO75841 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK1BO75841 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
UPK1BO75841 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK1BO75841 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK1BO75841 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK1BO75841 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK1BO75841 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK1BO75841 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
UPK1BO75841 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 AC010536.1-201ENST00000538868 2611 ntBASIC12.73□□□□□ -0.37
UPK1BO75841 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms