Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AL844908.2-201ENST00000609461 460 ntBASIC16.01■□□□□ 0.15
CCDC66A2RUB6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCDC66A2RUB6 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC16■□□□□ 0.15
CCDC66A2RUB6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16■□□□□ 0.15
CCDC66A2RUB6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC16■□□□□ 0.15
CCDC66A2RUB6 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CCDC66A2RUB6 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16■□□□□ 0.15
CCDC66A2RUB6 AL139400.1-201ENST00000366220 510 ntBASIC16■□□□□ 0.15
CCDC66A2RUB6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16■□□□□ 0.15
CCDC66A2RUB6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16■□□□□ 0.15
CCDC66A2RUB6 PMS2P2-201ENST00000425039 1128 ntBASIC16■□□□□ 0.15
CCDC66A2RUB6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16■□□□□ 0.15
CCDC66A2RUB6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16■□□□□ 0.15
CCDC66A2RUB6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16■□□□□ 0.15
CCDC66A2RUB6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16■□□□□ 0.15
CCDC66A2RUB6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16■□□□□ 0.15
CCDC66A2RUB6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16■□□□□ 0.15
CCDC66A2RUB6 SON-203ENST00000381679 7860 ntTSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 PCDHB18P-202ENST00000526308 3197 ntBASIC16■□□□□ 0.15
CCDC66A2RUB6 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC16■□□□□ 0.15
CCDC66A2RUB6 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC66A2RUB6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16■□□□□ 0.15
CCDC66A2RUB6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC66A2RUB6 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 AC068760.1-201ENST00000493579 1953 ntBASIC15.99■□□□□ 0.15
CCDC66A2RUB6 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC66A2RUB6 AC107890.1-201ENST00000422478 521 ntBASIC15.99■□□□□ 0.15
CCDC66A2RUB6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms