Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
SLC6A12P48065 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SLC6A12P48065 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLC6A12P48065 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC6A12P48065 REXO1L6P-201ENST00000603433 1515 ntBASIC14.1□□□□□ -0.15
SLC6A12P48065 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
SLC6A12P48065 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SLC6A12P48065 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.1□□□□□ -0.15
SLC6A12P48065 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 AL354877.1-201ENST00000424412 413 ntBASIC14.1□□□□□ -0.15
SLC6A12P48065 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 KLF2P1-201ENST00000447438 1042 ntBASIC14.1□□□□□ -0.15
SLC6A12P48065 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 TMEM198B-204ENST00000484016 896 ntBASIC14.1□□□□□ -0.15
SLC6A12P48065 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC6A12P48065 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC6A12P48065 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SLC6A12P48065 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SLC6A12P48065 AL162426.1-201ENST00000624141 743 ntBASIC14.1□□□□□ -0.15
SLC6A12P48065 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC6A12P48065 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SLC6A12P48065 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 AC005840.4-201ENST00000541242 2494 ntBASIC14.09□□□□□ -0.15
SLC6A12P48065 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC6A12P48065 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC6A12P48065 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC6A12P48065 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC6A12P48065 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC6A12P48065 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC6A12P48065 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.09□□□□□ -0.15
SLC6A12P48065 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC6A12P48065 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC6A12P48065 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC6A12P48065 AP005482.1-201ENST00000563722 1273 ntBASIC14.09□□□□□ -0.15
SLC6A12P48065 MIR4741-201ENST00000579822 90 ntBASIC14.09□□□□□ -0.15
SLC6A12P48065 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC6A12P48065 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC6A12P48065 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC6A12P48065 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SLC6A12P48065 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC6A12P48065 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC6A12P48065 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
SLC6A12P48065 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.08□□□□□ -0.15
SLC6A12P48065 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC6A12P48065 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms