Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 AL590440.2-201ENST00000641973 1595 ntBASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 AC005252.3-201ENST00000623855 2258 ntBASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 PUDPP3-201ENST00000445368 636 ntBASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 SORD2P-201ENST00000558556 1069 ntBASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 AC010319.3-201ENST00000597028 470 ntBASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
HNRNPCL4P0DMR1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 RN7SKP175-201ENST00000408472 289 ntBASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 AL391280.1-201ENST00000506969 1062 ntBASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HNRNPCL4P0DMR1 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms