Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 AC023274.1-201ENST00000418278 595 ntBASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 FAM58DP-201ENST00000428076 619 ntBASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 GAPDHP40-201ENST00000505218 1006 ntBASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 AC027601.4-201ENST00000611259 610 ntBASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 PCDHB18P-202ENST00000526308 3197 ntBASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 AC092053.3-201ENST00000641308 4975 ntBASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 AL136172.1-201ENST00000598590 1394 ntBASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 BEND3P3-201ENST00000611030 2440 ntBASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 SPDYE14P-201ENST00000442619 822 ntBASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 AC009078.2-202ENST00000463353 338 ntBASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 AC022145.2-201ENST00000598203 171 ntBASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 FAM197Y3-203ENST00000618346 717 ntBASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms