Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNNI2P48788 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNNI2P48788 LINC01101-201ENST00000622953 1884 ntBASIC17.37■□□□□ 0.37
TNNI2P48788 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.37■□□□□ 0.37
TNNI2P48788 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNNI2P48788 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TNNI2P48788 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNNI2P48788 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNNI2P48788 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.37■□□□□ 0.37
TNNI2P48788 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.37■□□□□ 0.37
TNNI2P48788 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TNNI2P48788 AL590440.2-201ENST00000641973 1595 ntBASIC17.36■□□□□ 0.37
TNNI2P48788 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
TNNI2P48788 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.36■□□□□ 0.37
TNNI2P48788 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.36■□□□□ 0.37
TNNI2P48788 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.36■□□□□ 0.37
TNNI2P48788 OR2R1P-201ENST00000441404 914 ntBASIC17.36■□□□□ 0.37
TNNI2P48788 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.36■□□□□ 0.37
TNNI2P48788 RN7SL530P-201ENST00000485097 298 ntBASIC17.36■□□□□ 0.37
TNNI2P48788 RN7SL81P-201ENST00000493781 261 ntBASIC17.36■□□□□ 0.37
TNNI2P48788 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.36■□□□□ 0.37
TNNI2P48788 MIR4522-201ENST00000584932 87 ntBASIC17.36■□□□□ 0.37
TNNI2P48788 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.36■□□□□ 0.37
TNNI2P48788 KRT8P28-201ENST00000433288 1390 ntBASIC17.36■□□□□ 0.37
TNNI2P48788 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.36■□□□□ 0.37
TNNI2P48788 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.36■□□□□ 0.37
TNNI2P48788 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TNNI2P48788 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.36■□□□□ 0.37
TNNI2P48788 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TNNI2P48788 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNNI2P48788 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
TNNI2P48788 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.36■□□□□ 0.37
TNNI2P48788 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TNNI2P48788 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.35■□□□□ 0.37
TNNI2P48788 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.35■□□□□ 0.37
TNNI2P48788 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TNNI2P48788 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.35■□□□□ 0.37
TNNI2P48788 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
TNNI2P48788 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.35■□□□□ 0.37
TNNI2P48788 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.35■□□□□ 0.37
TNNI2P48788 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 Z69890.1-201ENST00000382990 339 ntBASIC17.35■□□□□ 0.37
TNNI2P48788 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.35■□□□□ 0.37
TNNI2P48788 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.35■□□□□ 0.37
TNNI2P48788 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
TNNI2P48788 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.35■□□□□ 0.37
TNNI2P48788 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.35■□□□□ 0.37
TNNI2P48788 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.35■□□□□ 0.37
TNNI2P48788 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.35■□□□□ 0.37
TNNI2P48788 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.35■□□□□ 0.37
TNNI2P48788 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.35■□□□□ 0.37
TNNI2P48788 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TNNI2P48788 AL161772.1-201ENST00000610494 4412 ntBASIC17.35■□□□□ 0.37
TNNI2P48788 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TNNI2P48788 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.35■□□□□ 0.37
TNNI2P48788 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.35■□□□□ 0.37
TNNI2P48788 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.35■□□□□ 0.37
TNNI2P48788 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNNI2P48788 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
TNNI2P48788 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TNNI2P48788 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TNNI2P48788 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.34■□□□□ 0.37
TNNI2P48788 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNNI2P48788 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.34■□□□□ 0.37
TNNI2P48788 FTH1P22-201ENST00000456305 520 ntBASIC17.34■□□□□ 0.37
TNNI2P48788 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms