Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 MIR497HG-202ENST00000572453 3838 ntBASIC11.09□□□□□ -0.63
LTAP01374 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.09□□□□□ -0.63
LTAP01374 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.09□□□□□ -0.63
LTAP01374 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.09□□□□□ -0.63
LTAP01374 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 MEIS3P1-201ENST00000495167 958 ntBASIC11.09□□□□□ -0.63
LTAP01374 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 AC044860.1-202ENST00000559481 777 ntBASIC11.09□□□□□ -0.63
LTAP01374 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 AC093813.1-201ENST00000605066 256 ntBASIC11.09□□□□□ -0.63
LTAP01374 AL138828.2-201ENST00000615812 383 ntBASIC11.09□□□□□ -0.63
LTAP01374 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.09□□□□□ -0.63
LTAP01374 BX539320.1-201ENST00000623759 877 ntBASIC11.09□□□□□ -0.63
LTAP01374 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
LTAP01374 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.09□□□□□ -0.63
LTAP01374 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
LTAP01374 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.09□□□□□ -0.63
LTAP01374 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
LTAP01374 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.08□□□□□ -0.64
LTAP01374 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
LTAP01374 AC139712.1-201ENST00000378256 1875 ntBASIC11.08□□□□□ -0.64
LTAP01374 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.08□□□□□ -0.64
LTAP01374 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.08□□□□□ -0.64
LTAP01374 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LTAP01374 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.08□□□□□ -0.64
LTAP01374 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.08□□□□□ -0.64
LTAP01374 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.08□□□□□ -0.64
LTAP01374 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms