Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 DRD5P1-201ENST00000456605 1438 ntBASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 MEP1AP4-201ENST00000423244 1087 ntBASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 TPRX2P-201ENST00000535362 881 ntBASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AC093813.1-201ENST00000605066 256 ntBASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AC020658.7-201ENST00000624274 2442 ntBASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AC015909.5-201ENST00000624336 2266 ntBASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 RN7SL399P-201ENST00000471648 279 ntBASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AL049840.4-201ENST00000602422 811 ntBASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AC107373.2-201ENST00000607735 490 ntBASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AC004241.5-201ENST00000623870 2448 ntBASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 AC093525.8-201ENST00000624099 1342 ntBASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB4Q9UN71 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms