Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AC015656.1-201ENST00000624209 3578 ntBASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 ZBED1P1-201ENST00000502364 1930 ntBASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 MIR33B-201ENST00000385104 96 ntBASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AC078875.1-201ENST00000431907 724 ntBASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AC234782.1-201ENST00000451950 919 ntBASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 MIR4722-201ENST00000578292 60 ntBASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 FGD5P1-202ENST00000614866 2498 ntBASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 AJ011931.1-201ENST00000618749 2492 ntBASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.42■□□□□ 0.06
SHKBP1Q8TBC3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms