Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST2H2BCQ6DN03 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 KRT8P6-201ENST00000399259 1207 ntBASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 KRT19P4-201ENST00000443208 943 ntBASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 RN7SL672P-201ENST00000474091 317 ntBASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 RN7SKP155-201ENST00000516031 288 ntBASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 AC004923.3-201ENST00000527532 355 ntBASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 AL021707.6-201ENST00000609212 491 ntBASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 BX322534.1-201ENST00000635574 241 ntBASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 AC215524.1-201ENST00000635696 241 ntBASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 AL590556.2-202ENST00000636906 844 ntBASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HIST2H2BCQ6DN03 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 AC067931.2-201ENST00000623655 2003 ntBASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST2H2BCQ6DN03 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms