Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 ADAP1-204ENST00000446141 2085 ntTSL 218.08■□□□□ 0.488e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.06■□□□□ 0.488e-6■■■■■ 27.9
DDX59Q5T1V6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.488e-6■■■■■ 27.9
DDX59Q5T1V6 TERT-203ENST00000460137 2992 ntTSL 1 (best)17.98■□□□□ 0.478e-6■■■■■ 27.9
DDX59Q5T1V6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.478e-6■■■■■ 27.9
DDX59Q5T1V6 PLEKHM1P1-206ENST00000584585 1168 ntTSL 1 (best)17.78■□□□□ 0.448e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.66■□□□□ 0.428e-6■■■■■ 27.9
DDX59Q5T1V6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.368e-6■■■■■ 27.9
DDX59Q5T1V6 PKP3-204ENST00000526971 532 ntTSL 217.23■□□□□ 0.358e-6■■■■■ 27.9
DDX59Q5T1V6 COL9A3-206ENST00000466532 539 ntTSL 217.08■□□□□ 0.328e-6■■■■■ 27.9
DDX59Q5T1V6 COL9A3-203ENST00000462700 1237 ntTSL 317.05■□□□□ 0.328e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.03■□□□□ 0.328e-6■■■■■ 27.9
DDX59Q5T1V6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.94■□□□□ 0.38e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.288e-6■■■■■ 27.9
DDX59Q5T1V6 CCAR2-204ENST00000520536 2173 ntTSL 216.64■□□□□ 0.258e-6■■■■■ 27.9
DDX59Q5T1V6 BCL3-202ENST00000403534 1714 ntTSL 216.54■□□□□ 0.248e-6■■■■■ 27.9
DDX59Q5T1V6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.248e-6■■■■■ 27.9
DDX59Q5T1V6 PALM-206ENST00000589012 579 ntTSL 316.45■□□□□ 0.228e-6■■■■■ 27.9
DDX59Q5T1V6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.218e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-201ENST00000416295 1088 ntTSL 516.32■□□□□ 0.28e-6■■■■■ 27.9
DDX59Q5T1V6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.198e-6■■■■■ 27.9
DDX59Q5T1V6 BCL3-203ENST00000444487 923 ntTSL 516.2■□□□□ 0.188e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.188e-6■■■■■ 27.9
DDX59Q5T1V6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.178e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-214ENST00000619119 3158 ntTSL 515.95■□□□□ 0.148e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)15.89■□□□□ 0.138e-6■■■■■ 27.9
DDX59Q5T1V6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.86■□□□□ 0.138e-6■■■■■ 27.9
DDX59Q5T1V6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.138e-6■■■■■ 27.9
DDX59Q5T1V6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.128e-6■■■■■ 27.9
DDX59Q5T1V6 BCL3-208ENST00000477832 385 ntTSL 315.69■□□□□ 0.18e-6■■■■■ 27.9
DDX59Q5T1V6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.18e-6■■■■■ 27.9
DDX59Q5T1V6 TMEM184B-210ENST00000488844 566 ntTSL 415.62■□□□□ 0.098e-6■■■■■ 27.9
DDX59Q5T1V6 AATK-208ENST00000573469 754 ntTSL 515.6■□□□□ 0.098e-6■■■■■ 27.9
DDX59Q5T1V6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.071e-6■■■■■ 27.9
DDX59Q5T1V6 CCAR2-205ENST00000520738 2633 ntTSL 215.3■□□□□ 0.048e-6■■■■■ 27.9
DDX59Q5T1V6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.28■□□□□ 0.048e-6■■■■■ 27.9
DDX59Q5T1V6 MYOM3-204ENST00000475306 5094 ntTSL 215.28■□□□□ 0.048e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-205ENST00000594001 1417 ntTSL 215.25■□□□□ 0.038e-6■■■■■ 27.9
DDX59Q5T1V6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.028e-6■■■■■ 27.9
DDX59Q5T1V6 SSBP4-204ENST00000597724 865 ntTSL 515.14■□□□□ 0.018e-6■■■■■ 27.9
DDX59Q5T1V6 SSBP4-213ENST00000602088 622 ntTSL 515.14■□□□□ 0.018e-6■■■■■ 27.9
DDX59Q5T1V6 COX19-202ENST00000457254 1420 ntTSL 215.14■□□□□ 0.018e-6■■■■■ 27.9
DDX59Q5T1V6 PPFIA1-222ENST00000532504 5159 ntTSL 1 (best)15.06■□□□□ 08e-6■■■■■ 27.9
DDX59Q5T1V6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.028e-6■■■■■ 27.9
DDX59Q5T1V6 PLEKHM1P1-201ENST00000397718 1558 ntTSL 214.94□□□□□ -0.028e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.028e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-202ENST00000593761 891 ntTSL 514.87□□□□□ -0.038e-6■■■■■ 27.9
DDX59Q5T1V6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.048e-6■■■■■ 27.9
DDX59Q5T1V6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.048e-6■■■■■ 27.9
DDX59Q5T1V6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.8□□□□□ -0.048e-6■■■■■ 27.9
DDX59Q5T1V6 PLEKHM1P1-203ENST00000580919 1498 ntTSL 1 (best)14.69□□□□□ -0.068e-6■■■■■ 27.9
DDX59Q5T1V6 SEMA3B-203ENST00000419007 3283 ntTSL 214.66□□□□□ -0.068e-6■■■■■ 27.9
DDX59Q5T1V6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.64□□□□□ -0.078e-6■■■■■ 27.9
DDX59Q5T1V6 PALM-209ENST00000592870 1346 ntTSL 214.62□□□□□ -0.078e-6■■■■■ 27.9
DDX59Q5T1V6 CCAR2-209ENST00000521436 1840 ntTSL 514.33□□□□□ -0.128e-6■■■■■ 27.9
DDX59Q5T1V6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.158e-6■■■■■ 27.9
DDX59Q5T1V6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.158e-6■■■■■ 27.9
DDX59Q5T1V6 RCC1L-206ENST00000618102 950 ntTSL 214.06□□□□□ -0.168e-6■■■■■ 27.9
DDX59Q5T1V6 SSBP4-211ENST00000601614 628 ntTSL 214.01□□□□□ -0.178e-6■■■■■ 27.9
DDX59Q5T1V6 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.188e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-213ENST00000488527 584 ntTSL 513.91□□□□□ -0.188e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-219ENST00000601208 989 ntTSL 513.68□□□□□ -0.228e-6■■■■■ 27.9
DDX59Q5T1V6 RNF123-208ENST00000469978 889 ntTSL 313.53□□□□□ -0.248e-6■■■■■ 27.9
DDX59Q5T1V6 PPFIA1-216ENST00000530746 575 ntTSL 313.51□□□□□ -0.258e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-209ENST00000463358 595 ntTSL 313.43□□□□□ -0.268e-6■■■■■ 27.9
DDX59Q5T1V6 RNF123-205ENST00000444689 442 ntTSL 313.38□□□□□ -0.278e-6■■■■■ 27.9
DDX59Q5T1V6 SSBP4-214ENST00000607020 504 ntTSL 313.11□□□□□ -0.318e-6■■■■■ 27.9
DDX59Q5T1V6 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.318e-6■■■■■ 27.9
DDX59Q5T1V6 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.02□□□□□ -0.338e-6■■■■■ 27.9
DDX59Q5T1V6 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.338e-6■■■■■ 27.9
DDX59Q5T1V6 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.85□□□□□ -0.358e-6■■■■■ 27.9
DDX59Q5T1V6 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.368e-6■■■■■ 27.9
DDX59Q5T1V6 TBC1D9B-217ENST00000522472 668 ntTSL 512.72□□□□□ -0.378e-6■■■■■ 27.9
DDX59Q5T1V6 TMEM184B-205ENST00000436674 3667 ntTSL 1 (best)12.7□□□□□ -0.388e-6■■■■■ 27.9
DDX59Q5T1V6 AC105036.3-203ENST00000567875 652 ntTSL 212.63□□□□□ -0.398e-6■■■■■ 27.9
DDX59Q5T1V6 AC105036.3-202ENST00000565138 674 ntTSL 312.63□□□□□ -0.398e-6■■■■■ 27.9
DDX59Q5T1V6 TMEM184B-213ENST00000633438 1369 ntTSL 512.55□□□□□ -0.48e-6■■■■■ 27.9
DDX59Q5T1V6 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.53□□□□□ -0.48e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-221ENST00000602082 894 ntTSL 1 (best)12.49□□□□□ -0.418e-6■■■■■ 27.9
DDX59Q5T1V6 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.432e-7■■■■■ 27.9
DDX59Q5T1V6 ADAP1-202ENST00000435943 559 ntTSL 512.38□□□□□ -0.438e-6■■■■■ 27.9
DDX59Q5T1V6 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC12.33□□□□□ -0.442e-7■■■■■ 27.9
DDX59Q5T1V6 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.18□□□□□ -0.468e-6■■■■■ 27.9
DDX59Q5T1V6 HM13-210ENST00000466766 358 ntTSL 212.16□□□□□ -0.468e-6■■■■■ 27.9
DDX59Q5T1V6 CCDC40-205ENST00000571028 593 ntTSL 512.16□□□□□ -0.468e-6■■■■■ 27.9
DDX59Q5T1V6 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC12.02□□□□□ -0.498e-6■■■■■ 27.9
DDX59Q5T1V6 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.498e-6■■■■■ 27.9
DDX59Q5T1V6 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC11.96□□□□□ -0.52e-7■■■■■ 27.9
DDX59Q5T1V6 SCAMP1-207ENST00000621999 4509 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.518e-6■■■■■ 27.9
DDX59Q5T1V6 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.548e-6■■■■■ 27.9
DDX59Q5T1V6 HM13-223ENST00000496438 699 ntTSL 511.56□□□□□ -0.568e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-207ENST00000453823 560 ntTSL 411.46□□□□□ -0.578e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-217ENST00000597778 3898 ntTSL 211.42□□□□□ -0.588e-6■■■■■ 27.9
DDX59Q5T1V6 AC105036.3-204ENST00000568707 789 ntTSL 2 BASIC11.27□□□□□ -0.618e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-208ENST00000454383 576 ntTSL 411.21□□□□□ -0.618e-6■■■■■ 27.9
DDX59Q5T1V6 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.638e-6■■■■■ 27.9
DDX59Q5T1V6 TMEM184B-207ENST00000464059 430 ntTSL 510.99□□□□□ -0.658e-6■■■■■ 27.9
DDX59Q5T1V6 USP6NL-201ENST00000277575 4512 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.668e-6■■■■■ 27.9
DDX59Q5T1V6 ADAP1-210ENST00000477906 579 ntTSL 310.89□□□□□ -0.678e-6■■■■■ 27.9
DDX59Q5T1V6 PPFIA1-220ENST00000532024 563 ntTSL 310.87□□□□□ -0.678e-6■■■■■ 27.9
Retrieved 100 of 7,289 protein–RNA pairs in 129.1 ms