RNA–Protein interactions for RNA: ENST00000466766.1

HM13-210, Transcript of histocompatibility minor 13, humanhuman

TSL 2

Gene HM13, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-210ENST00000466766 NISCHQ9Y2I1 1504 aa30.35■■■□□ 2.45
HM13-210ENST00000466766 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
HM13-210ENST00000466766 ZCCHC6Q5VYS8 1495 aaKnown RBP25.41■■□□□ 1.66
HM13-210ENST00000466766 ABCC9O60706 1549 aa25.41■■□□□ 1.66
HM13-210ENST00000466766 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
HM13-210ENST00000466766 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
HM13-210ENST00000466766 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
HM13-210ENST00000466766 NACADO15069 1562 aa24.97■■□□□ 1.59
HM13-210ENST00000466766 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
HM13-210ENST00000466766 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
HM13-210ENST00000466766 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
HM13-210ENST00000466766 UNC13AQ9UPW8 1703 aa24.05■■□□□ 1.44
HM13-210ENST00000466766 BICRAQ9NZM4 1560 aa23.97■■□□□ 1.43
HM13-210ENST00000466766 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
HM13-210ENST00000466766 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
HM13-210ENST00000466766 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
HM13-210ENST00000466766 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
HM13-210ENST00000466766 SMARCA4P51532 1647 aa23.35■■□□□ 1.33
HM13-210ENST00000466766 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
HM13-210ENST00000466766 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
HM13-210ENST00000466766 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
HM13-210ENST00000466766 PEG3Q9GZU2 1588 aa23.2■■□□□ 1.3
HM13-210ENST00000466766 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
HM13-210ENST00000466766 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
HM13-210ENST00000466766 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
HM13-210ENST00000466766 WIZO95785 1651 aa23.06■■□□□ 1.28
HM13-210ENST00000466766 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
HM13-210ENST00000466766 HMGXB3Q12766 1538 aa22.97■■□□□ 1.27
HM13-210ENST00000466766 TOP2AP11388 1531 aaKnown RBP22.96■■□□□ 1.27
HM13-210ENST00000466766 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
HM13-210ENST00000466766 DNAJC5BQ9UF47 199 aa22.76■■□□□ 1.23
HM13-210ENST00000466766 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
HM13-210ENST00000466766 CADPSQ9ULU8 1353 aa22.42■■□□□ 1.18
HM13-210ENST00000466766 CFTRP13569 1480 aa22.41■■□□□ 1.18
HM13-210ENST00000466766 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
HM13-210ENST00000466766 PDS5BQ9NTI5 1447 aa22.18■■□□□ 1.14
HM13-210ENST00000466766 NESP48681 1621 aa22.17■■□□□ 1.14
HM13-210ENST00000466766 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
HM13-210ENST00000466766 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
HM13-210ENST00000466766 FANCD2Q9BXW9 1451 aa22.1■■□□□ 1.13
HM13-210ENST00000466766 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
HM13-210ENST00000466766 CEP164Q9UPV0 1460 aa22.02■■□□□ 1.12
HM13-210ENST00000466766 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
HM13-210ENST00000466766 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
HM13-210ENST00000466766 ERCC6Q03468 1493 aa21.89■■□□□ 1.09
HM13-210ENST00000466766 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
HM13-210ENST00000466766 CUX1P39880 1505 aa21.86■■□□□ 1.09
HM13-210ENST00000466766 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
HM13-210ENST00000466766 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
HM13-210ENST00000466766 SYNJ1O43426 1573 aa21.84■■□□□ 1.09
HM13-210ENST00000466766 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
HM13-210ENST00000466766 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
HM13-210ENST00000466766 URB2Q14146 1524 aaKnown RBP21.81■■□□□ 1.08
HM13-210ENST00000466766 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
HM13-210ENST00000466766 WDR62O43379 1518 aa21.75■■□□□ 1.07
HM13-210ENST00000466766 FGD5Q6ZNL6 1462 aa21.7■■□□□ 1.06
HM13-210ENST00000466766 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
HM13-210ENST00000466766 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
HM13-210ENST00000466766 SOGA1O94964 1423 aa21.63■■□□□ 1.05
HM13-210ENST00000466766 EEA1Q15075 1411 aa21.63■■□□□ 1.05
HM13-210ENST00000466766 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.04
HM13-210ENST00000466766 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
HM13-210ENST00000466766 CUX2O14529 1486 aa21.56■■□□□ 1.04
HM13-210ENST00000466766 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
HM13-210ENST00000466766 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
HM13-210ENST00000466766 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
HM13-210ENST00000466766 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
HM13-210ENST00000466766 WDR97A6NE52 1622 aa21.46■■□□□ 1.03
HM13-210ENST00000466766 RUSC2Q8N2Y8 1516 aa21.44■■□□□ 1.02
HM13-210ENST00000466766 TDRD9Q8NDG6 1382 aaKnown RBP21.4■■□□□ 1.02
HM13-210ENST00000466766 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
HM13-210ENST00000466766 IGF1RP08069 1367 aa21.38■■□□□ 1.01
HM13-210ENST00000466766 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
HM13-210ENST00000466766 ABCA5Q8WWZ7 1642 aa21.36■■□□□ 1.01
HM13-210ENST00000466766 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
HM13-210ENST00000466766 ZNF608Q9ULD9 1512 aaPredicted RBP21.32■■□□□ 1
HM13-210ENST00000466766 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
HM13-210ENST00000466766 GRIN2BQ13224 1484 aa21.31■■□□□ 1
HM13-210ENST00000466766 PRXQ9BXM0 1461 aa21.3■■□□□ 1
HM13-210ENST00000466766 CARMIL1Q5VZK9 1371 aa21.26■□□□□ 0.99
HM13-210ENST00000466766 EIF4G3O43432 1585 aaKnown RBP21.24■□□□□ 0.99
HM13-210ENST00000466766 KIF21BO75037 1637 aa21.23■□□□□ 0.99
HM13-210ENST00000466766 CUL7Q14999 1698 aa21.21■□□□□ 0.99
HM13-210ENST00000466766 FHAD1B1AJZ9 1412 aa21.2■□□□□ 0.98
HM13-210ENST00000466766 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
HM13-210ENST00000466766 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
HM13-210ENST00000466766 MAGI1Q96QZ7 1491 aaPredicted RBP21.19■□□□□ 0.98
HM13-210ENST00000466766 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
HM13-210ENST00000466766 LOC105371045A0A1W2PR82 267 aa21.15■□□□□ 0.98
HM13-210ENST00000466766 SNAPC4Q5SXM2 1469 aa21.12■□□□□ 0.97
HM13-210ENST00000466766 TNIKQ9UKE5 1360 aa21.1■□□□□ 0.97
HM13-210ENST00000466766 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
HM13-210ENST00000466766 SYNJ2O15056 1496 aa21.09■□□□□ 0.97
HM13-210ENST00000466766 UBTFP17480 764 aaKnown RBP21.08■□□□□ 0.97
HM13-210ENST00000466766 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
HM13-210ENST00000466766 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
HM13-210ENST00000466766 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
HM13-210ENST00000466766 FBLN2P98095 1184 aa20.93■□□□□ 0.94
HM13-210ENST00000466766 NUP160Q12769 1436 aa20.92■□□□□ 0.94
HM13-210ENST00000466766 KIAA0586Q9BVV6 1533 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms