RNA–Protein interactions for RNA: ENST00000597778.5

NAPA-217, Transcript of NSF attachment protein alpha, humanhuman

TSL 2

Gene NAPA, Length 3,898 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAPA-217ENST00000597778 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
NAPA-217ENST00000597778 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
NAPA-217ENST00000597778 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
NAPA-217ENST00000597778 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
NAPA-217ENST00000597778 PCGF6Q9BYE7 350 aa19.18■□□□□ 0.66
NAPA-217ENST00000597778 PPARGC1BQ86YN6 1023 aaKnown RBP18.92■□□□□ 0.62
NAPA-217ENST00000597778 HRCP23327 699 aa18.88■□□□□ 0.61
NAPA-217ENST00000597778 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
NAPA-217ENST00000597778 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
NAPA-217ENST00000597778 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
NAPA-217ENST00000597778 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
NAPA-217ENST00000597778 CCDC180Q9P1Z9 1646 aa18.35■□□□□ 0.53
NAPA-217ENST00000597778 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
NAPA-217ENST00000597778 TTBK1Q5TCY1 1321 aaPredicted RBP18.17■□□□□ 0.5
NAPA-217ENST00000597778 TRIM26Q12899 539 aaPredicted RBP18.12■□□□□ 0.49
NAPA-217ENST00000597778 ZEB1P37275 1124 aaPredicted RBP17.99■□□□□ 0.47
NAPA-217ENST00000597778 MYO15BQ96JP2 1530 aa17.96■□□□□ 0.47
NAPA-217ENST00000597778 CCER1Q8TC90 406 aaPredicted RBP17.93■□□□□ 0.46
NAPA-217ENST00000597778 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
NAPA-217ENST00000597778 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
NAPA-217ENST00000597778 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
NAPA-217ENST00000597778 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
NAPA-217ENST00000597778 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
NAPA-217ENST00000597778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.43
NAPA-217ENST00000597778 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
NAPA-217ENST00000597778 NEUROD1Q13562 356 aa17.58■□□□□ 0.4
NAPA-217ENST00000597778 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
NAPA-217ENST00000597778 ACIN1Q9UKV3 1341 aaKnown RBP17.57■□□□□ 0.4
NAPA-217ENST00000597778 MYT1Q01538 1121 aa17.54■□□□□ 0.4
NAPA-217ENST00000597778 DCAF1Q9Y4B6 1507 aa17.44■□□□□ 0.38
NAPA-217ENST00000597778 RANGAP1P46060 587 aaPredicted RBP17.43■□□□□ 0.38
NAPA-217ENST00000597778 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
NAPA-217ENST00000597778 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.35
NAPA-217ENST00000597778 APLP2Q06481 763 aa17.19■□□□□ 0.34
NAPA-217ENST00000597778 ABCC9O60706 1549 aa17.11■□□□□ 0.33
NAPA-217ENST00000597778 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.33
NAPA-217ENST00000597778 SCRIBQ14160 1630 aa17.08■□□□□ 0.32
NAPA-217ENST00000597778 BCANQ96GW7 911 aa17.06■□□□□ 0.32
NAPA-217ENST00000597778 MIER1Q8N108 512 aa17■□□□□ 0.31
NAPA-217ENST00000597778 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
NAPA-217ENST00000597778 ITGAEP38570 1179 aa16.92■□□□□ 0.3
NAPA-217ENST00000597778 ERICH6Q7L0X2 663 aa16.89■□□□□ 0.29
NAPA-217ENST00000597778 NACADO15069 1562 aa16.89■□□□□ 0.29
NAPA-217ENST00000597778 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
NAPA-217ENST00000597778 NEFLP07196 543 aa16.83■□□□□ 0.28
NAPA-217ENST00000597778 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
NAPA-217ENST00000597778 UNC13AQ9UPW8 1703 aa16.71■□□□□ 0.26
NAPA-217ENST00000597778 ATP1B4Q9UN42 357 aaPredicted RBP16.68■□□□□ 0.26
NAPA-217ENST00000597778 FKBP8Q14318 412 aa16.62■□□□□ 0.25
NAPA-217ENST00000597778 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
NAPA-217ENST00000597778 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
NAPA-217ENST00000597778 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.24
NAPA-217ENST00000597778 CNGB1Q14028 1251 aaPredicted RBP16.56■□□□□ 0.24
NAPA-217ENST00000597778 ANP32EQ9BTT0 268 aa16.55■□□□□ 0.24
NAPA-217ENST00000597778 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
NAPA-217ENST00000597778 BCL11AQ9H165 835 aa16.53■□□□□ 0.24
NAPA-217ENST00000597778 WIZO95785 1651 aa16.53■□□□□ 0.24
NAPA-217ENST00000597778 TRIM52Q96A61 297 aa16.48■□□□□ 0.23
NAPA-217ENST00000597778 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.23
NAPA-217ENST00000597778 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
NAPA-217ENST00000597778 TSHZ2Q9NRE2 1034 aa16.43■□□□□ 0.22
NAPA-217ENST00000597778 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
NAPA-217ENST00000597778 IRX6P78412 446 aaPredicted RBP16.41■□□□□ 0.22
NAPA-217ENST00000597778 ABCC8Q09428 1581 aa16.39■□□□□ 0.22
NAPA-217ENST00000597778 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
NAPA-217ENST00000597778 KCNH8Q96L42 1107 aa16.34■□□□□ 0.21
NAPA-217ENST00000597778 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
NAPA-217ENST00000597778 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.2
NAPA-217ENST00000597778 SOGA1O94964 1423 aa16.32■□□□□ 0.2
NAPA-217ENST00000597778 CDK11AQ9UQ88 783 aaPredicted RBP16.3■□□□□ 0.2
NAPA-217ENST00000597778 ANP32CO43423 234 aa16.29■□□□□ 0.2
NAPA-217ENST00000597778 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
NAPA-217ENST00000597778 CLSPNQ9HAW4 1339 aa16.27■□□□□ 0.19
NAPA-217ENST00000597778 NBR1Q14596 966 aa16.24■□□□□ 0.19
NAPA-217ENST00000597778 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
NAPA-217ENST00000597778 RBM19Q9Y4C8 960 aaKnown RBP16.22■□□□□ 0.19
NAPA-217ENST00000597778 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.18
NAPA-217ENST00000597778 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
NAPA-217ENST00000597778 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
NAPA-217ENST00000597778 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
NAPA-217ENST00000597778 RTL5Q5HYW3 569 aaPredicted RBP16.14■□□□□ 0.17
NAPA-217ENST00000597778 CLIP1P30622 1438 aa16.14■□□□□ 0.17
NAPA-217ENST00000597778 P3H3Q8IVL6 736 aa16.13■□□□□ 0.17
NAPA-217ENST00000597778 SIN3AQ96ST3 1273 aa16.11■□□□□ 0.17
NAPA-217ENST00000597778 TOP2AP11388 1531 aaKnown RBP16.07■□□□□ 0.16
NAPA-217ENST00000597778 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
NAPA-217ENST00000597778 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
NAPA-217ENST00000597778 SMARCA2P51531 1590 aa16.05■□□□□ 0.16
NAPA-217ENST00000597778 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
NAPA-217ENST00000597778 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
NAPA-217ENST00000597778 KANK4Q5T7N3 995 aaPredicted RBP16■□□□□ 0.15
NAPA-217ENST00000597778 GOLGA3Q08378 1498 aa16■□□□□ 0.15
NAPA-217ENST00000597778 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
NAPA-217ENST00000597778 RTN4Q9NQC3 1192 aaKnown RBP15.99■□□□□ 0.15
NAPA-217ENST00000597778 PEG3Q9GZU2 1588 aa15.98■□□□□ 0.15
NAPA-217ENST00000597778 B4GALNT3Q6L9W6 998 aa15.95■□□□□ 0.14
NAPA-217ENST00000597778 DEKP35659 375 aaKnown RBP15.93■□□□□ 0.14
NAPA-217ENST00000597778 ZNF326Q5BKZ1 582 aaKnown RBP15.9■□□□□ 0.14
NAPA-217ENST00000597778 EIF5BO60841 1220 aaKnown RBP15.9■□□□□ 0.14
NAPA-217ENST00000597778 ANP32AP39687 249 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms