RNA–Protein interactions for RNA: ENST00000457254.5

COX19-202, Transcript of cytochrome c oxidase assembly factor COX19, humanhuman

TSL 2

Gene COX19, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX19-202ENST00000457254 NISCHQ9Y2I1 1504 aa40.62■■■■■ 4.09
COX19-202ENST00000457254 CCDC180Q9P1Z9 1646 aa36.16■■■■□ 3.38
COX19-202ENST00000457254 ABCC9O60706 1549 aa35.55■■■■□ 3.28
COX19-202ENST00000457254 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
COX19-202ENST00000457254 RB1CC1Q8TDY2 1594 aa34.14■■■■□ 3.06
COX19-202ENST00000457254 NACADO15069 1562 aa34.05■■■■□ 3.04
COX19-202ENST00000457254 ZCCHC6Q5VYS8 1495 aaKnown RBP33.79■■■■□ 3
COX19-202ENST00000457254 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
COX19-202ENST00000457254 DCAF1Q9Y4B6 1507 aa33.57■■■□□ 2.96
COX19-202ENST00000457254 UNC13AQ9UPW8 1703 aa33.32■■■□□ 2.92
COX19-202ENST00000457254 PABPN1Q86U42 306 aaKnown RBP eCLIP33.23■■■□□ 2.91
COX19-202ENST00000457254 SCRIBQ14160 1630 aa33.04■■■□□ 2.88
COX19-202ENST00000457254 BICRAQ9NZM4 1560 aa33■■■□□ 2.87
COX19-202ENST00000457254 SHROOM4Q9ULL8 1493 aa32.69■■■□□ 2.82
COX19-202ENST00000457254 DNAJC5BQ9UF47 199 aa32.65■■■□□ 2.82
COX19-202ENST00000457254 EIF4G1Q04637 1599 aaKnown RBP32.21■■■□□ 2.75
COX19-202ENST00000457254 CC2D2AQ9P2K1 1620 aa32.12■■■□□ 2.73
COX19-202ENST00000457254 CECR2Q9BXF3 1484 aa31.95■■■□□ 2.71
COX19-202ENST00000457254 SMARCA4P51532 1647 aa31.55■■■□□ 2.64
COX19-202ENST00000457254 BAZ1AQ9NRL2 1556 aaPredicted RBP31.53■■■□□ 2.64
COX19-202ENST00000457254 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
COX19-202ENST00000457254 SMARCA2P51531 1590 aa31.4■■■□□ 2.62
COX19-202ENST00000457254 NCAPD3P42695 1498 aa31.39■■■□□ 2.61
COX19-202ENST00000457254 MROH2BQ7Z745 1585 aa31.29■■■□□ 2.6
COX19-202ENST00000457254 HMGXB3Q12766 1538 aa31.22■■■□□ 2.59
COX19-202ENST00000457254 BAZ1BQ9UIG0 1483 aaKnown RBP31.2■■■□□ 2.59
COX19-202ENST00000457254 PEG3Q9GZU2 1588 aa31.19■■■□□ 2.58
COX19-202ENST00000457254 WIZO95785 1651 aa30.98■■■□□ 2.55
COX19-202ENST00000457254 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
COX19-202ENST00000457254 ERCC6Q03468 1493 aa30.73■■■□□ 2.51
COX19-202ENST00000457254 NESP48681 1621 aa30.69■■■□□ 2.5
COX19-202ENST00000457254 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
COX19-202ENST00000457254 LAMC3Q9Y6N6 1575 aa30.62■■■□□ 2.49
COX19-202ENST00000457254 CADPSQ9ULU8 1353 aa30.52■■■□□ 2.48
COX19-202ENST00000457254 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
COX19-202ENST00000457254 KIF21AQ7Z4S6 1674 aa30.34■■■□□ 2.45
COX19-202ENST00000457254 CUX2O14529 1486 aa30.34■■■□□ 2.45
COX19-202ENST00000457254 CCDC88BA6NC98 1476 aa30.28■■■□□ 2.44
COX19-202ENST00000457254 CFTRP13569 1480 aa30.27■■■□□ 2.44
COX19-202ENST00000457254 SUPT5HO00267 1087 aaKnown RBP30.22■■■□□ 2.43
COX19-202ENST00000457254 THOC2Q8NI27 1593 aaKnown RBP30.21■■■□□ 2.43
COX19-202ENST00000457254 FANCD2Q9BXW9 1451 aa30.17■■■□□ 2.42
COX19-202ENST00000457254 CEP164Q9UPV0 1460 aa30.16■■■□□ 2.42
COX19-202ENST00000457254 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
COX19-202ENST00000457254 PRDM2Q13029 1718 aa30.07■■■□□ 2.4
COX19-202ENST00000457254 WDR62O43379 1518 aa29.98■■■□□ 2.39
COX19-202ENST00000457254 URB2Q14146 1524 aaKnown RBP29.83■■■□□ 2.37
COX19-202ENST00000457254 ABCC8Q09428 1581 aa29.7■■■□□ 2.35
COX19-202ENST00000457254 TOPBP1Q92547 1522 aa29.65■■■□□ 2.34
COX19-202ENST00000457254 DNMBPQ6XZF7 1577 aa29.62■■■□□ 2.33
COX19-202ENST00000457254 DNAJC5Q9H3Z4 198 aa29.55■■■□□ 2.32
COX19-202ENST00000457254 IFT140Q96RY7 1462 aa29.52■■■□□ 2.32
COX19-202ENST00000457254 POLA1P09884 1462 aaPredicted RBP29.39■■■□□ 2.3
COX19-202ENST00000457254 CUX1P39880 1505 aa29.36■■■□□ 2.29
COX19-202ENST00000457254 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
COX19-202ENST00000457254 SOGA1O94964 1423 aa29.32■■■□□ 2.28
COX19-202ENST00000457254 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
COX19-202ENST00000457254 TARBP1Q13395 1621 aaKnown RBP29.3■■■□□ 2.28
COX19-202ENST00000457254 RAD54L2Q9Y4B4 1467 aa29.28■■■□□ 2.28
COX19-202ENST00000457254 EIF4G3O43432 1585 aaKnown RBP29.25■■■□□ 2.27
COX19-202ENST00000457254 AQRO60306 1485 aaKnown RBP eCLIP29.22■■■□□ 2.276e-6■■■■□ 25.1
COX19-202ENST00000457254 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.26
COX19-202ENST00000457254 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
COX19-202ENST00000457254 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
COX19-202ENST00000457254 TOP2BQ02880 1626 aa29.11■■■□□ 2.25
COX19-202ENST00000457254 WDR97A6NE52 1622 aa29.1■■■□□ 2.25
COX19-202ENST00000457254 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
COX19-202ENST00000457254 SYNJ1O43426 1573 aa29.07■■■□□ 2.24
COX19-202ENST00000457254 FBLN2P98095 1184 aa29.03■■■□□ 2.24
COX19-202ENST00000457254 ABCA10Q8WWZ4 1543 aa29.01■■■□□ 2.23
COX19-202ENST00000457254 GRIN2BQ13224 1484 aa28.98■■■□□ 2.23
COX19-202ENST00000457254 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
COX19-202ENST00000457254 SNAPC4Q5SXM2 1469 aa28.95■■■□□ 2.22
COX19-202ENST00000457254 CHD1O14646 1710 aa28.93■■■□□ 2.22
COX19-202ENST00000457254 CHMP7Q8WUX9 453 aaPredicted RBP28.91■■■□□ 2.22
COX19-202ENST00000457254 PBRM1Q86U86 1689 aa28.9■■■□□ 2.22
COX19-202ENST00000457254 MAGI1Q96QZ7 1491 aaPredicted RBP28.9■■■□□ 2.22
COX19-202ENST00000457254 ABCA5Q8WWZ7 1642 aa28.88■■■□□ 2.21
COX19-202ENST00000457254 SYNJ2O15056 1496 aa28.79■■■□□ 2.2
COX19-202ENST00000457254 ERICH3Q5RHP9 1530 aa28.68■■■□□ 2.18
COX19-202ENST00000457254 TRIM41Q8WV44 630 aa28.67■■■□□ 2.18
COX19-202ENST00000457254 ADAMTS12P58397 1594 aa28.63■■■□□ 2.17
COX19-202ENST00000457254 FHAD1B1AJZ9 1412 aa28.63■■■□□ 2.17
COX19-202ENST00000457254 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
COX19-202ENST00000457254 RIMBP3CA6NJZ7 1639 aa28.61■■■□□ 2.17
COX19-202ENST00000457254 RIMBP3BA6NNM3 1639 aa28.61■■■□□ 2.17
COX19-202ENST00000457254 RIMBP3Q9UFD9 1639 aa28.61■■■□□ 2.17
COX19-202ENST00000457254 ARHGEF11O15085 1522 aa28.6■■■□□ 2.17
COX19-202ENST00000457254 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
COX19-202ENST00000457254 CLASP1Q7Z460 1538 aa28.55■■■□□ 2.16
COX19-202ENST00000457254 IGF1RP08069 1367 aa28.46■■■□□ 2.15
COX19-202ENST00000457254 CYB5RLQ6IPT4 315 aa28.44■■■□□ 2.14
COX19-202ENST00000457254 CUL7Q14999 1698 aa28.42■■■□□ 2.14
COX19-202ENST00000457254 NUP160Q12769 1436 aa28.42■■■□□ 2.14
COX19-202ENST00000457254 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
COX19-202ENST00000457254 CARMIL1Q5VZK9 1371 aa28.34■■■□□ 2.13
COX19-202ENST00000457254 ARAP1Q96P48 1450 aa28.33■■■□□ 2.13
COX19-202ENST00000457254 RUSC2Q8N2Y8 1516 aa28.25■■■□□ 2.11
COX19-202ENST00000457254 JPH4Q96JJ6 628 aa28.24■■■□□ 2.11
COX19-202ENST00000457254 SHROOM2Q13796 1616 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms