RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
PPFIA1-220ENST00000532024 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
PPFIA1-220ENST00000532024 ABCC9O60706 1549 aa24.15■■□□□ 1.46
PPFIA1-220ENST00000532024 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
PPFIA1-220ENST00000532024 NACADO15069 1562 aa23.44■■□□□ 1.34
PPFIA1-220ENST00000532024 DCAF8L2P0C7V8 631 aa23.43■■□□□ 1.34
PPFIA1-220ENST00000532024 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
PPFIA1-220ENST00000532024 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
PPFIA1-220ENST00000532024 DCAF1Q9Y4B6 1507 aa23.37■■□□□ 1.33
PPFIA1-220ENST00000532024 UNC13AQ9UPW8 1703 aa22.81■■□□□ 1.24
PPFIA1-220ENST00000532024 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
PPFIA1-220ENST00000532024 BICRAQ9NZM4 1560 aa22.6■■□□□ 1.21
PPFIA1-220ENST00000532024 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
PPFIA1-220ENST00000532024 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
PPFIA1-220ENST00000532024 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
PPFIA1-220ENST00000532024 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
PPFIA1-220ENST00000532024 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
PPFIA1-220ENST00000532024 CC2D2AQ9P2K1 1620 aa21.87■■□□□ 1.09
PPFIA1-220ENST00000532024 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
PPFIA1-220ENST00000532024 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
PPFIA1-220ENST00000532024 SMARCA2P51531 1590 aa21.69■■□□□ 1.06
PPFIA1-220ENST00000532024 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
PPFIA1-220ENST00000532024 ATAD2BQ9ULI0 1458 aa21.62■■□□□ 1.05
PPFIA1-220ENST00000532024 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
PPFIA1-220ENST00000532024 NCAPD3P42695 1498 aa21.58■■□□□ 1.05
PPFIA1-220ENST00000532024 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
PPFIA1-220ENST00000532024 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
PPFIA1-220ENST00000532024 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.03
PPFIA1-220ENST00000532024 WIZO95785 1651 aa21.47■■□□□ 1.03
PPFIA1-220ENST00000532024 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
PPFIA1-220ENST00000532024 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
PPFIA1-220ENST00000532024 DNAJC5Q9H3Z4 198 aa21.12■□□□□ 0.97
PPFIA1-220ENST00000532024 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
PPFIA1-220ENST00000532024 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
PPFIA1-220ENST00000532024 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
PPFIA1-220ENST00000532024 NESP48681 1621 aa20.94■□□□□ 0.94
PPFIA1-220ENST00000532024 CFTRP13569 1480 aa20.9■□□□□ 0.94
PPFIA1-220ENST00000532024 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
PPFIA1-220ENST00000532024 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
PPFIA1-220ENST00000532024 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
PPFIA1-220ENST00000532024 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
PPFIA1-220ENST00000532024 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
PPFIA1-220ENST00000532024 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
PPFIA1-220ENST00000532024 MRC2Q9UBG0 1479 aa20.63■□□□□ 0.89
PPFIA1-220ENST00000532024 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
PPFIA1-220ENST00000532024 CUX2O14529 1486 aa20.56■□□□□ 0.88
PPFIA1-220ENST00000532024 WDR62O43379 1518 aa20.54■□□□□ 0.88
PPFIA1-220ENST00000532024 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
PPFIA1-220ENST00000532024 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
PPFIA1-220ENST00000532024 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
PPFIA1-220ENST00000532024 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
PPFIA1-220ENST00000532024 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
PPFIA1-220ENST00000532024 CUX1P39880 1505 aa20.35■□□□□ 0.85
PPFIA1-220ENST00000532024 TOP2BQ02880 1626 aa20.29■□□□□ 0.84
PPFIA1-220ENST00000532024 BIVM-ERCC5R4GMW8 1640 aa20.28■□□□□ 0.84
PPFIA1-220ENST00000532024 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
PPFIA1-220ENST00000532024 IFT140Q96RY7 1462 aa20.27■□□□□ 0.84
PPFIA1-220ENST00000532024 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
PPFIA1-220ENST00000532024 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
PPFIA1-220ENST00000532024 SOGA1O94964 1423 aa20.19■□□□□ 0.82
PPFIA1-220ENST00000532024 TARBP1Q13395 1621 aaKnown RBP20.18■□□□□ 0.82
PPFIA1-220ENST00000532024 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
PPFIA1-220ENST00000532024 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
PPFIA1-220ENST00000532024 EIF4G3O43432 1585 aaKnown RBP20.09■□□□□ 0.81
PPFIA1-220ENST00000532024 ABCA10Q8WWZ4 1543 aa20.09■□□□□ 0.81
PPFIA1-220ENST00000532024 ZNF608Q9ULD9 1512 aaPredicted RBP20.08■□□□□ 0.81
PPFIA1-220ENST00000532024 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
PPFIA1-220ENST00000532024 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
PPFIA1-220ENST00000532024 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.79
PPFIA1-220ENST00000532024 ABCA5Q8WWZ7 1642 aa19.99■□□□□ 0.79
PPFIA1-220ENST00000532024 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
PPFIA1-220ENST00000532024 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
PPFIA1-220ENST00000532024 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
PPFIA1-220ENST00000532024 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
PPFIA1-220ENST00000532024 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
PPFIA1-220ENST00000532024 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
PPFIA1-220ENST00000532024 ERICH3Q5RHP9 1530 aa19.88■□□□□ 0.77
PPFIA1-220ENST00000532024 SNAPC4Q5SXM2 1469 aa19.87■□□□□ 0.77
PPFIA1-220ENST00000532024 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
PPFIA1-220ENST00000532024 ADAMTS12P58397 1594 aa19.79■□□□□ 0.76
PPFIA1-220ENST00000532024 CUL7Q14999 1698 aa19.78■□□□□ 0.76
PPFIA1-220ENST00000532024 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
PPFIA1-220ENST00000532024 CHD1O14646 1710 aa19.77■□□□□ 0.76
PPFIA1-220ENST00000532024 FBLN2P98095 1184 aa19.77■□□□□ 0.76
PPFIA1-220ENST00000532024 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
PPFIA1-220ENST00000532024 EEA1Q15075 1411 aa19.76■□□□□ 0.75
PPFIA1-220ENST00000532024 IGF1RP08069 1367 aa19.73■□□□□ 0.75
PPFIA1-220ENST00000532024 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
PPFIA1-220ENST00000532024 GRIN2AQ12879 1464 aa19.7■□□□□ 0.74
PPFIA1-220ENST00000532024 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
PPFIA1-220ENST00000532024 CARMIL1Q5VZK9 1371 aa19.67■□□□□ 0.74
PPFIA1-220ENST00000532024 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
PPFIA1-220ENST00000532024 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
PPFIA1-220ENST00000532024 NUP160Q12769 1436 aa19.58■□□□□ 0.72
PPFIA1-220ENST00000532024 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
PPFIA1-220ENST00000532024 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
PPFIA1-220ENST00000532024 CEP170Q5SW79 1584 aa19.56■□□□□ 0.72
PPFIA1-220ENST00000532024 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
PPFIA1-220ENST00000532024 KIF21BO75037 1637 aa19.49■□□□□ 0.71
PPFIA1-220ENST00000532024 KIAA0586Q9BVV6 1533 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms