RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
USP6NL-201ENST00000277575 NISCHQ9Y2I1 1504 aa19.62■□□□□ 0.73
USP6NL-201ENST00000277575 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
USP6NL-201ENST00000277575 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
USP6NL-201ENST00000277575 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.5
USP6NL-201ENST00000277575 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
USP6NL-201ENST00000277575 APLP2Q06481 763 aa17.82■□□□□ 0.44
USP6NL-201ENST00000277575 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
USP6NL-201ENST00000277575 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
USP6NL-201ENST00000277575 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
USP6NL-201ENST00000277575 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
USP6NL-201ENST00000277575 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
USP6NL-201ENST00000277575 ATP1B4Q9UN42 357 aaPredicted RBP17.29■□□□□ 0.36
USP6NL-201ENST00000277575 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
USP6NL-201ENST00000277575 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
USP6NL-201ENST00000277575 ZEB1P37275 1124 aaPredicted RBP17.08■□□□□ 0.32
USP6NL-201ENST00000277575 PPARGC1BQ86YN6 1023 aaKnown RBP16.99■□□□□ 0.31
USP6NL-201ENST00000277575 ABCC9O60706 1549 aa16.95■□□□□ 0.3
USP6NL-201ENST00000277575 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
USP6NL-201ENST00000277575 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
USP6NL-201ENST00000277575 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
USP6NL-201ENST00000277575 CENPBP07199 599 aaPredicted RBP16.83■□□□□ 0.29
USP6NL-201ENST00000277575 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
USP6NL-201ENST00000277575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
USP6NL-201ENST00000277575 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
USP6NL-201ENST00000277575 ITGAEP38570 1179 aa16.72■□□□□ 0.27
USP6NL-201ENST00000277575 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
USP6NL-201ENST00000277575 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
USP6NL-201ENST00000277575 NEFLP07196 543 aa16.5■□□□□ 0.23
USP6NL-201ENST00000277575 HRCP23327 699 aa16.49■□□□□ 0.23
USP6NL-201ENST00000277575 POLR3GLQ9BT43 218 aa16.41■□□□□ 0.22
USP6NL-201ENST00000277575 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
USP6NL-201ENST00000277575 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.2
USP6NL-201ENST00000277575 FBLN2P98095 1184 aa16.26■□□□□ 0.19
USP6NL-201ENST00000277575 CNGB1Q14028 1251 aaPredicted RBP16.26■□□□□ 0.19
USP6NL-201ENST00000277575 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
USP6NL-201ENST00000277575 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
USP6NL-201ENST00000277575 SCRIBQ14160 1630 aa16.21■□□□□ 0.19
USP6NL-201ENST00000277575 TRIM52Q96A61 297 aa16.2■□□□□ 0.18
USP6NL-201ENST00000277575 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
USP6NL-201ENST00000277575 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
USP6NL-201ENST00000277575 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
USP6NL-201ENST00000277575 DIEXFQ68CQ4 756 aaKnown RBP16.09■□□□□ 0.17
USP6NL-201ENST00000277575 ARID3CA6NKF2 412 aa16.04■□□□□ 0.16
USP6NL-201ENST00000277575 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
USP6NL-201ENST00000277575 ZNF326Q5BKZ1 582 aaKnown RBP15.98■□□□□ 0.15
USP6NL-201ENST00000277575 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
USP6NL-201ENST00000277575 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.14
USP6NL-201ENST00000277575 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
USP6NL-201ENST00000277575 ANP32CO43423 234 aa15.82■□□□□ 0.12
USP6NL-201ENST00000277575 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
USP6NL-201ENST00000277575 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
USP6NL-201ENST00000277575 CLSPNQ9HAW4 1339 aa15.73■□□□□ 0.11
USP6NL-201ENST00000277575 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
USP6NL-201ENST00000277575 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
USP6NL-201ENST00000277575 BCANQ96GW7 911 aa15.69■□□□□ 0.1
USP6NL-201ENST00000277575 NACADO15069 1562 aa15.67■□□□□ 0.1
USP6NL-201ENST00000277575 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
USP6NL-201ENST00000277575 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
USP6NL-201ENST00000277575 CHIC2Q9UKJ5 165 aa15.62■□□□□ 0.09
USP6NL-201ENST00000277575 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
USP6NL-201ENST00000277575 ESF1Q9H501 851 aaKnown RBP15.62■□□□□ 0.09
USP6NL-201ENST00000277575 MYT1Q01538 1121 aa15.6■□□□□ 0.09
USP6NL-201ENST00000277575 GTF3C3Q9Y5Q9 886 aa15.59■□□□□ 0.09
USP6NL-201ENST00000277575 CLIP1P30622 1438 aa15.59■□□□□ 0.09
USP6NL-201ENST00000277575 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
USP6NL-201ENST00000277575 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.09
USP6NL-201ENST00000277575 TSPY4P0CV99 314 aa15.56■□□□□ 0.08
USP6NL-201ENST00000277575 TSPY10P0CW01 314 aa15.56■□□□□ 0.08
USP6NL-201ENST00000277575 BAZ1BQ9UIG0 1483 aaKnown RBP15.56■□□□□ 0.08
USP6NL-201ENST00000277575 WRNQ14191 1432 aaPredicted RBP eCLIP15.54■□□□□ 0.08
USP6NL-201ENST00000277575 NEFMP07197 916 aa15.54■□□□□ 0.08
USP6NL-201ENST00000277575 EEA1Q15075 1411 aa15.53■□□□□ 0.08
USP6NL-201ENST00000277575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
USP6NL-201ENST00000277575 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
USP6NL-201ENST00000277575 SLC24A1O60721 1099 aa15.49■□□□□ 0.07
USP6NL-201ENST00000277575 ZBTB47Q9UFB7 747 aaPredicted RBP15.48■□□□□ 0.07
USP6NL-201ENST00000277575 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
USP6NL-201ENST00000277575 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
USP6NL-201ENST00000277575 RTL5Q5HYW3 569 aaPredicted RBP15.46■□□□□ 0.07
USP6NL-201ENST00000277575 GOLGA3Q08378 1498 aa15.46■□□□□ 0.06
USP6NL-201ENST00000277575 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
USP6NL-201ENST00000277575 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
USP6NL-201ENST00000277575 CEP162Q5TB80 1403 aa15.44■□□□□ 0.06
USP6NL-201ENST00000277575 KIF27Q86VH2 1401 aa15.44■□□□□ 0.06
USP6NL-201ENST00000277575 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
USP6NL-201ENST00000277575 PLEKHD1A6NEE1 506 aa15.42■□□□□ 0.06
USP6NL-201ENST00000277575 ACIN1Q9UKV3 1341 aaKnown RBP15.41■□□□□ 0.06
USP6NL-201ENST00000277575 KCNH8Q96L42 1107 aa15.41■□□□□ 0.06
USP6NL-201ENST00000277575 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
USP6NL-201ENST00000277575 RRP7BPQ9NSQ0 103 aa15.4■□□□□ 0.06
USP6NL-201ENST00000277575 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
USP6NL-201ENST00000277575 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
USP6NL-201ENST00000277575 HNRNPUQ00839 825 aaKnown RBP eCLIP15.36■□□□□ 0.05
USP6NL-201ENST00000277575 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
USP6NL-201ENST00000277575 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
USP6NL-201ENST00000277575 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.05
USP6NL-201ENST00000277575 TMC1Q8TDI8 760 aa15.31■□□□□ 0.04
USP6NL-201ENST00000277575 CFDP1Q9UEE9 299 aaPredicted RBP15.31■□□□□ 0.04
USP6NL-201ENST00000277575 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms