RNA–Protein interactions for RNA: ENST00000496438.5

HM13-223, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-223ENST00000496438 NISCHQ9Y2I1 1504 aa28.62■■■□□ 2.17
HM13-223ENST00000496438 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
HM13-223ENST00000496438 ABCC9O60706 1549 aa25.08■■□□□ 1.61
HM13-223ENST00000496438 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
HM13-223ENST00000496438 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
HM13-223ENST00000496438 NACADO15069 1562 aa24.03■■□□□ 1.44
HM13-223ENST00000496438 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
HM13-223ENST00000496438 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
HM13-223ENST00000496438 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
HM13-223ENST00000496438 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
HM13-223ENST00000496438 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
HM13-223ENST00000496438 PABPN1Q86U42 306 aaKnown RBP eCLIP23.34■■□□□ 1.33
HM13-223ENST00000496438 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
HM13-223ENST00000496438 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
HM13-223ENST00000496438 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
HM13-223ENST00000496438 EIF4G1Q04637 1599 aaKnown RBP22.77■■□□□ 1.24
HM13-223ENST00000496438 CC2D2AQ9P2K1 1620 aa22.72■■□□□ 1.23
HM13-223ENST00000496438 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
HM13-223ENST00000496438 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
HM13-223ENST00000496438 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
HM13-223ENST00000496438 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
HM13-223ENST00000496438 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
HM13-223ENST00000496438 NCAPD3P42695 1498 aa22.12■■□□□ 1.13
HM13-223ENST00000496438 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
HM13-223ENST00000496438 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
HM13-223ENST00000496438 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
HM13-223ENST00000496438 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
HM13-223ENST00000496438 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
HM13-223ENST00000496438 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
HM13-223ENST00000496438 WIZO95785 1651 aa21.87■■□□□ 1.09
HM13-223ENST00000496438 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.07
HM13-223ENST00000496438 NESP48681 1621 aa21.66■■□□□ 1.06
HM13-223ENST00000496438 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
HM13-223ENST00000496438 ERCC6Q03468 1493 aa21.63■■□□□ 1.05
HM13-223ENST00000496438 KIF21AQ7Z4S6 1674 aa21.51■■□□□ 1.03
HM13-223ENST00000496438 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
HM13-223ENST00000496438 CUX2O14529 1486 aa21.45■■□□□ 1.02
HM13-223ENST00000496438 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
HM13-223ENST00000496438 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
HM13-223ENST00000496438 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.02
HM13-223ENST00000496438 PRDM2Q13029 1718 aa21.33■■□□□ 1.01
HM13-223ENST00000496438 CFTRP13569 1480 aa21.32■■□□□ 1
HM13-223ENST00000496438 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
HM13-223ENST00000496438 FANCD2Q9BXW9 1451 aa21.25■□□□□ 0.99
HM13-223ENST00000496438 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
HM13-223ENST00000496438 WDR62O43379 1518 aa21.2■□□□□ 0.98
HM13-223ENST00000496438 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
HM13-223ENST00000496438 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
HM13-223ENST00000496438 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
HM13-223ENST00000496438 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
HM13-223ENST00000496438 ABCC8Q09428 1581 aa20.89■□□□□ 0.93
HM13-223ENST00000496438 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
HM13-223ENST00000496438 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
HM13-223ENST00000496438 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
HM13-223ENST00000496438 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
HM13-223ENST00000496438 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
HM13-223ENST00000496438 TARBP1Q13395 1621 aaKnown RBP20.73■□□□□ 0.91
HM13-223ENST00000496438 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
HM13-223ENST00000496438 ZNF608Q9ULD9 1512 aaPredicted RBP20.72■□□□□ 0.91
HM13-223ENST00000496438 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
HM13-223ENST00000496438 CUX1P39880 1505 aa20.71■□□□□ 0.91
HM13-223ENST00000496438 EIF4G3O43432 1585 aaKnown RBP20.71■□□□□ 0.91
HM13-223ENST00000496438 TOP2BQ02880 1626 aa20.7■□□□□ 0.9
HM13-223ENST00000496438 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
HM13-223ENST00000496438 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
HM13-223ENST00000496438 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
HM13-223ENST00000496438 SOGA1O94964 1423 aa20.59■□□□□ 0.89
HM13-223ENST00000496438 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.888e-7■□□□□ 9.1
HM13-223ENST00000496438 CHD1O14646 1710 aa20.51■□□□□ 0.87
HM13-223ENST00000496438 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
HM13-223ENST00000496438 PBRM1Q86U86 1689 aa20.47■□□□□ 0.87
HM13-223ENST00000496438 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
HM13-223ENST00000496438 ABCA10Q8WWZ4 1543 aa20.44■□□□□ 0.86
HM13-223ENST00000496438 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
HM13-223ENST00000496438 EEA1Q15075 1411 aa20.43■□□□□ 0.86
HM13-223ENST00000496438 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
HM13-223ENST00000496438 GRIN2BQ13224 1484 aa20.39■□□□□ 0.85
HM13-223ENST00000496438 GAPVD1Q14C86 1478 aa20.38■□□□□ 0.85
HM13-223ENST00000496438 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
HM13-223ENST00000496438 RUSC2Q8N2Y8 1516 aa20.32■□□□□ 0.84
HM13-223ENST00000496438 FBLN2P98095 1184 aa20.31■□□□□ 0.84
HM13-223ENST00000496438 SYNJ2O15056 1496 aa20.29■□□□□ 0.84
HM13-223ENST00000496438 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
HM13-223ENST00000496438 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.84
HM13-223ENST00000496438 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.84
HM13-223ENST00000496438 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.84
HM13-223ENST00000496438 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.84
HM13-223ENST00000496438 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
HM13-223ENST00000496438 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
HM13-223ENST00000496438 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
HM13-223ENST00000496438 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
HM13-223ENST00000496438 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
HM13-223ENST00000496438 ERICH3Q5RHP9 1530 aa20.21■□□□□ 0.83
HM13-223ENST00000496438 KIF21BO75037 1637 aa20.19■□□□□ 0.82
HM13-223ENST00000496438 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
HM13-223ENST00000496438 FHAD1B1AJZ9 1412 aa20.13■□□□□ 0.81
HM13-223ENST00000496438 PRXQ9BXM0 1461 aa20.11■□□□□ 0.81
HM13-223ENST00000496438 GOLGA3Q08378 1498 aa20.1■□□□□ 0.81
HM13-223ENST00000496438 LOC105371045A0A1W2PR82 267 aa20.09■□□□□ 0.81
HM13-223ENST00000496438 IGF1RP08069 1367 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms