Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF4P23510 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF4P23510 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF4P23510 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
TNFSF4P23510 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF4P23510 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF4P23510 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF4P23510 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF4P23510 AL139125.2-201ENST00000623134 1869 ntBASIC19.43■□□□□ 0.7
TNFSF4P23510 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF4P23510 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TNFSF4P23510 LINC00543-201ENST00000567234 1845 ntBASIC19.43■□□□□ 0.7
TNFSF4P23510 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFSF4P23510 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF4P23510 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF4P23510 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF4P23510 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TNFSF4P23510 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.42■□□□□ 0.7
TNFSF4P23510 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.42■□□□□ 0.7
TNFSF4P23510 AC131212.1-201ENST00000613771 668 ntBASIC19.42■□□□□ 0.7
TNFSF4P23510 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF4P23510 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TNFSF4P23510 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFSF4P23510 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF4P23510 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF4P23510 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.42■□□□□ 0.7
TNFSF4P23510 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF4P23510 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.41■□□□□ 0.7
TNFSF4P23510 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF4P23510 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF4P23510 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF4P23510 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF4P23510 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF4P23510 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF4P23510 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF4P23510 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF4P23510 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.41■□□□□ 0.7
TNFSF4P23510 AL356740.2-201ENST00000601559 647 ntBASIC19.41■□□□□ 0.7
TNFSF4P23510 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.41■□□□□ 0.7
TNFSF4P23510 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.41■□□□□ 0.7
TNFSF4P23510 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF4P23510 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TNFSF4P23510 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TNFSF4P23510 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TNFSF4P23510 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF4P23510 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF4P23510 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF4P23510 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF4P23510 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF4P23510 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF4P23510 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF4P23510 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF4P23510 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF4P23510 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF4P23510 ALDH1A3-203ENST00000557963 1670 ntBASIC19.39■□□□□ 0.69
TNFSF4P23510 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF4P23510 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF4P23510 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF4P23510 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF4P23510 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF4P23510 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TNFSF4P23510 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF4P23510 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.38■□□□□ 0.69
TNFSF4P23510 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF4P23510 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF4P23510 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF4P23510 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF4P23510 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF4P23510 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFSF4P23510 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF4P23510 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF4P23510 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF4P23510 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF4P23510 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF4P23510 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF4P23510 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TNFSF4P23510 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF4P23510 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF4P23510 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF4P23510 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF4P23510 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF4P23510 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF4P23510 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF4P23510 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF4P23510 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF4P23510 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF4P23510 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF4P23510 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF4P23510 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF4P23510 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF4P23510 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TNFSF4P23510 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TNFSF4P23510 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF4P23510 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFSF4P23510 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFSF4P23510 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF4P23510 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF4P23510 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF4P23510 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TNFSF4P23510 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms