Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 PTK2-232ENST00000521395 540 ntTSL 48.49□□□□□ -1.055e-7■■□□□ 14.5
SFPQP23246 PTK2-205ENST00000517453 571 ntTSL 48.48□□□□□ -1.055e-7■■□□□ 14.5
SFPQP23246 PTK2-235ENST00000521907 542 ntTSL 48.43□□□□□ -1.065e-7■■□□□ 14.5
SFPQP23246 PTK2-222ENST00000520475 570 ntTSL 58.22□□□□□ -1.095e-7■■□□□ 14.5
SFPQP23246 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.115e-7■■□□□ 14.5
SFPQP23246 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.41□□□□□ -1.225e-7■■□□□ 14.5
SFPQP23246 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.85□□□□□ -1.475e-7■■□□□ 14.5
SFPQP23246 VGLL4-217ENST00000480288 586 ntTSL 410.44□□□□□ -0.742e-6■■□□□ 14.5
SFPQP23246 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.892e-6■■□□□ 14.5
SFPQP23246 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.222e-6■■□□□ 14.5
SFPQP23246 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.44■□□□□ 0.222e-6■■□□□ 14.5
SFPQP23246 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.243e-6■■□□□ 14.5
SFPQP23246 NXN-208ENST00000575171 544 ntTSL 210.71□□□□□ -0.693e-6■■□□□ 14.5
SFPQP23246 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC15.38■□□□□ 0.057e-7■■□□□ 14.4
SFPQP23246 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.092e-6■■□□□ 14.4
SFPQP23246 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC15.37■□□□□ 0.052e-6■■□□□ 14.4
SFPQP23246 ZFAND3-207ENST00000474522 563 ntTSL 56.45□□□□□ -1.382e-6■■□□□ 14.4
SFPQP23246 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.033e-6■■□□□ 14.4
SFPQP23246 TNRC6B-208ENST00000489500 564 ntTSL 29.89□□□□□ -0.833e-6■■□□□ 14.4
SFPQP23246 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.423e-6■■□□□ 14.4
SFPQP23246 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.423e-6■■□□□ 14.4
SFPQP23246 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.15□□□□□ -1.433e-6■■□□□ 14.4
SFPQP23246 LRMDA-209ENST00000593699 1124 ntTSL 1 (best)12.29□□□□□ -0.448e-7■■□□□ 14.4
SFPQP23246 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.685e-7■■□□□ 14.4
SFPQP23246 CDC14B-209ENST00000474602 4960 ntTSL 1 (best)25.18■■□□□ 1.625e-7■■□□□ 14.4
SFPQP23246 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.915e-7■■□□□ 14.4
SFPQP23246 CDC14B-207ENST00000463547 553 ntTSL 416.64■□□□□ 0.255e-7■■□□□ 14.4
SFPQP23246 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC15.56■□□□□ 0.085e-7■■□□□ 14.4
SFPQP23246 CDC14B-204ENST00000412285 5271 ntTSL 1 (best)10.74□□□□□ -0.695e-7■■□□□ 14.4
SFPQP23246 CDC14B-205ENST00000415608 684 ntTSL 57.9□□□□□ -1.145e-7■■□□□ 14.4
SFPQP23246 CDC14B-213ENST00000496750 649 ntTSL 35.12□□□□□ -1.595e-7■■□□□ 14.4
SFPQP23246 BLCAP-212ENST00000456058 572 ntTSL 422.59■■□□□ 1.211e-8■■□□□ 14.3
SFPQP23246 GSE1-216ENST00000637419 2683 ntTSL 523.24■■□□□ 1.311e-6■■□□□ 14.3
SFPQP23246 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.65■■□□□ 1.061e-6■■□□□ 14.3
SFPQP23246 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC14.23□□□□□ -0.131e-6■■□□□ 14.3
SFPQP23246 LINC00511-214ENST00000581801 379 ntTSL 312.16□□□□□ -0.461e-6■■□□□ 14.3
SFPQP23246 LINC00511-210ENST00000580861 467 ntTSL 49.8□□□□□ -0.841e-6■■□□□ 14.3
SFPQP23246 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.111e-6■■□□□ 14.3
SFPQP23246 PLCB1-213ENST00000626114 598 ntTSL 511.72□□□□□ -0.531e-6■■□□□ 14.3
SFPQP23246 PLCB1-227ENST00000636825 3020 ntTSL 58.86□□□□□ -0.991e-6■■□□□ 14.3
SFPQP23246 PLCB1-221ENST00000635830 3237 ntTSL 58.46□□□□□ -1.061e-6■■□□□ 14.3
SFPQP23246 PLCB1-226ENST00000636784 100 ntTSL 53.88□□□□□ -1.791e-6■■□□□ 14.3
SFPQP23246 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.071e-6■■□□□ 14.2
SFPQP23246 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.64■□□□□ 0.581e-6■■□□□ 14.2
SFPQP23246 RAB7A-207ENST00000491681 552 ntTSL 26.01□□□□□ -1.451e-6■■□□□ 14.2
SFPQP23246 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.21■□□□□ 0.513e-6■■□□□ 14.2
SFPQP23246 EHBP1-204ENST00000405482 1311 ntTSL 225.16■■□□□ 1.621e-6■■□□□ 14.2
SFPQP23246 EHBP1-205ENST00000413434 533 ntTSL 410.8□□□□□ -0.681e-6■■□□□ 14.2
SFPQP23246 EHBP1-217ENST00000472809 1374 ntTSL 510.43□□□□□ -0.741e-6■■□□□ 14.2
SFPQP23246 EHBP1-211ENST00000449820 539 ntTSL 59.95□□□□□ -0.821e-6■■□□□ 14.2
SFPQP23246 EHBP1-207ENST00000426940 586 ntTSL 48.8□□□□□ -11e-6■■□□□ 14.2
SFPQP23246 EHBP1-208ENST00000427809 581 ntTSL 46.37□□□□□ -1.391e-6■■□□□ 14.2
SFPQP23246 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)5.4□□□□□ -1.541e-6■■□□□ 14.2
SFPQP23246 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.02■□□□□ 0.312e-6■■□□□ 14.2
SFPQP23246 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.08■□□□□ 0.162e-6■■□□□ 14.2
SFPQP23246 SHANK2-209ENST00000445654 522 ntTSL 315.76■□□□□ 0.112e-6■■□□□ 14.2
SFPQP23246 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.1■□□□□ 0.012e-6■■□□□ 14.2
SFPQP23246 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC14.26□□□□□ -0.132e-6■■□□□ 14.2
SFPQP23246 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC13.61□□□□□ -0.232e-6■■□□□ 14.2
SFPQP23246 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC13.5□□□□□ -0.252e-6■■□□□ 14.2
SFPQP23246 SHANK2-205ENST00000412252 1376 ntTSL 513.23□□□□□ -0.292e-6■■□□□ 14.2
SFPQP23246 MAGI1-205ENST00000464060 2247 ntTSL 1 (best)26.95■■□□□ 1.92e-6■■□□□ 14.2
SFPQP23246 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.792e-6■■□□□ 14.2
SFPQP23246 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.612e-6■■□□□ 14.2
SFPQP23246 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.28■□□□□ 0.522e-6■■□□□ 14.2
SFPQP23246 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.372e-6■■□□□ 14.2
SFPQP23246 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC14.95□□□□□ -0.027e-7■■□□□ 14.2
SFPQP23246 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC13.19□□□□□ -0.37e-7■■□□□ 14.2
SFPQP23246 GOLGA3-204ENST00000534967 484 ntTSL 329.67■■■□□ 2.344e-8■■□□□ 14.2
SFPQP23246 PDXK-206ENST00000398085 796 ntTSL 324.35■■□□□ 1.494e-8■■□□□ 14.2
SFPQP23246 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.09■■□□□ 1.454e-8■■□□□ 14.2
SFPQP23246 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.134e-8■■□□□ 14.2
SFPQP23246 FOXN3-211ENST00000555855 851 ntTSL 521.86■■□□□ 1.094e-8■■□□□ 14.2
SFPQP23246 PDXK-212ENST00000470029 583 ntTSL 321.7■■□□□ 1.064e-8■■□□□ 14.2
SFPQP23246 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 14e-8■■□□□ 14.2
SFPQP23246 PDXK-218ENST00000498040 888 ntTSL 520.26■□□□□ 0.834e-8■■□□□ 14.2
SFPQP23246 SOS1-204ENST00000451331 579 ntTSL 418.22■□□□□ 0.514e-8■■□□□ 14.2
SFPQP23246 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.44e-8■■□□□ 14.2
SFPQP23246 GOLGA3-205ENST00000537317 298 ntTSL 316.69■□□□□ 0.264e-8■■□□□ 14.2
SFPQP23246 SLC38A10-207ENST00000542075 2903 ntTSL 216.42■□□□□ 0.224e-8■■□□□ 14.2
SFPQP23246 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15.85■□□□□ 0.134e-8■■□□□ 14.2
SFPQP23246 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.124e-8■■□□□ 14.2
SFPQP23246 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.194e-8■■□□□ 14.2
SFPQP23246 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.384e-8■■□□□ 14.2
SFPQP23246 CHFR-219ENST00000541341 581 ntTSL 311.95□□□□□ -0.54e-8■■□□□ 14.2
SFPQP23246 PDXK-207ENST00000438837 342 ntTSL 39.98□□□□□ -0.814e-8■■□□□ 14.2
SFPQP23246 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -12e-6■■□□□ 14.2
SFPQP23246 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -12e-6■■□□□ 14.2
SFPQP23246 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.072e-6■■□□□ 14.2
SFPQP23246 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.254e-8■■□□□ 14.2
SFPQP23246 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.554e-8■■□□□ 14.2
SFPQP23246 POLA1-203ENST00000480125 580 ntTSL 35.23□□□□□ -1.572e-6■■□□□ 14.2
SFPQP23246 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.634e-8■■□□□ 14.2
SFPQP23246 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.741e-6■■□□□ 14.2
SFPQP23246 SEPT9-219ENST00000588575 559 ntTSL 422.78■■□□□ 1.247e-7■■□□□ 14.2
SFPQP23246 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.347e-7■■□□□ 14.2
SFPQP23246 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.097e-7■■□□□ 14.2
SFPQP23246 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.77■□□□□ 0.277e-7■■□□□ 14.1
SFPQP23246 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.016e-7■■□□□ 14.1
SFPQP23246 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.27■□□□□ 0.687e-7■■□□□ 14.1
Retrieved 100 of 4,991 protein–RNA pairs in 171.6 ms