RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 AEBP2Q6ZN18 517 aaPredicted RBP33.83■■■■□ 3.01
TNRC6B-208ENST00000489500 CHIC1Q5VXU3 224 aa32.3■■■□□ 2.76
TNRC6B-208ENST00000489500 SENP3Q9H4L4 574 aaPredicted RBP28.71■■■□□ 2.19
TNRC6B-208ENST00000489500 PHF23Q9BUL5 403 aaPredicted RBP28.44■■■□□ 2.14
TNRC6B-208ENST00000489500 FOXD1Q16676 465 aa26.81■■□□□ 1.88
TNRC6B-208ENST00000489500 PLPPR3Q6T4P5 718 aa25.88■■□□□ 1.73
TNRC6B-208ENST00000489500 PPP6R1Q9UPN7 881 aa25.3■■□□□ 1.64
TNRC6B-208ENST00000489500 ADRA2BP18089 450 aa25.22■■□□□ 1.63
TNRC6B-208ENST00000489500 PIAS4Q8N2W9 510 aaPredicted RBP25.07■■□□□ 1.6
TNRC6B-208ENST00000489500 MSH5O43196 834 aa24.91■■□□□ 1.58
TNRC6B-208ENST00000489500 POTEDQ86YR6 584 aa23.98■■□□□ 1.43
TNRC6B-208ENST00000489500 MAPK8IP2Q13387 824 aaPredicted RBP23.12■■□□□ 1.29
TNRC6B-208ENST00000489500 SCAF1Q9H7N4 1312 aaKnown RBP22.95■■□□□ 1.26
TNRC6B-208ENST00000489500 DMRT2Q9Y5R5 561 aa22.84■■□□□ 1.25
TNRC6B-208ENST00000489500 PPP4R3CPQ6ZMV5 832 aa22.76■■□□□ 1.23
TNRC6B-208ENST00000489500 CNKSR2Q8WXI2 1034 aa22.23■■□□□ 1.15
TNRC6B-208ENST00000489500 HOXD11P31277 338 aaPredicted RBP22.08■■□□□ 1.13
TNRC6B-208ENST00000489500 RNF216Q9NWF9 866 aaPredicted RBP21.97■■□□□ 1.11
TNRC6B-208ENST00000489500 DCAF8L1A6NGE4 600 aa21.91■■□□□ 1.1
TNRC6B-208ENST00000489500 NCBP3Q53F19 620 aaKnown RBP21.88■■□□□ 1.09
TNRC6B-208ENST00000489500 NPM3O75607 178 aaKnown RBP21.66■■□□□ 1.06
TNRC6B-208ENST00000489500 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
TNRC6B-208ENST00000489500 KCNA4P22459 653 aa21.48■■□□□ 1.03
TNRC6B-208ENST00000489500 RNF39Q9H2S5 420 aa21.32■■□□□ 1
TNRC6B-208ENST00000489500 CACNB1Q02641 598 aaPredicted RBP21.27■■□□□ 1
TNRC6B-208ENST00000489500 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
TNRC6B-208ENST00000489500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.05■□□□□ 0.96
TNRC6B-208ENST00000489500 C1QBPQ07021 282 aaKnown RBP20.98■□□□□ 0.95
TNRC6B-208ENST00000489500 U3KPZ7 1027 aaPredicted RBP20.67■□□□□ 0.9
TNRC6B-208ENST00000489500 SLC4A2P04920 1241 aa20.65■□□□□ 0.9
TNRC6B-208ENST00000489500 SPINK5Q9NQ38 1064 aaPredicted RBP20.32■□□□□ 0.84
TNRC6B-208ENST00000489500 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
TNRC6B-208ENST00000489500 CAPN15O75808 1086 aa20.23■□□□□ 0.83
TNRC6B-208ENST00000489500 DSG3P32926 999 aa20.06■□□□□ 0.8
TNRC6B-208ENST00000489500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.04■□□□□ 0.8
TNRC6B-208ENST00000489500 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
TNRC6B-208ENST00000489500 TRHP20396 242 aaPredicted RBP19.98■□□□□ 0.79
TNRC6B-208ENST00000489500 APLP2Q06481 763 aa19.98■□□□□ 0.79
TNRC6B-208ENST00000489500 SAMD1Q6SPF0 538 aaPredicted RBP19.98■□□□□ 0.79
TNRC6B-208ENST00000489500 MYCNP04198 464 aaPredicted RBP19.96■□□□□ 0.79
TNRC6B-208ENST00000489500 FOXD4L1Q9NU39 408 aa19.91■□□□□ 0.78
TNRC6B-208ENST00000489500 ZNF219Q9P2Y4 722 aaPredicted RBP19.87■□□□□ 0.77
TNRC6B-208ENST00000489500 ABCB7O75027 752 aa19.82■□□□□ 0.76
TNRC6B-208ENST00000489500 ZBTB22O15209 634 aa19.79■□□□□ 0.76
TNRC6B-208ENST00000489500 ATF5Q9Y2D1 282 aaPredicted RBP19.61■□□□□ 0.73
TNRC6B-208ENST00000489500 POLA2Q14181 598 aa19.5■□□□□ 0.71
TNRC6B-208ENST00000489500 CCDC180Q9P1Z9 1646 aa19.45■□□□□ 0.7
TNRC6B-208ENST00000489500 ABCC9O60706 1549 aa19.24■□□□□ 0.67
TNRC6B-208ENST00000489500 ATXN8OSP0DMR3 200 aa19.23■□□□□ 0.67
TNRC6B-208ENST00000489500 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
TNRC6B-208ENST00000489500 RBM42Q9BTD8 480 aaKnown RBP19.05■□□□□ 0.64
TNRC6B-208ENST00000489500 ZBTB12Q9Y330 459 aaPredicted RBP19.01■□□□□ 0.63
TNRC6B-208ENST00000489500 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
TNRC6B-208ENST00000489500 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
TNRC6B-208ENST00000489500 POTEHQ6S545 545 aa18.81■□□□□ 0.6
TNRC6B-208ENST00000489500 FBLN2P98095 1184 aa18.7■□□□□ 0.58
TNRC6B-208ENST00000489500 AKT1S1Q96B36 256 aa18.7■□□□□ 0.58
TNRC6B-208ENST00000489500 MKRN4PQ13434 485 aaPredicted RBP18.69■□□□□ 0.58
TNRC6B-208ENST00000489500 CHRDL2Q6WN34 429 aa18.6■□□□□ 0.57
TNRC6B-208ENST00000489500 REM2Q8IYK8 340 aaPredicted RBP18.57■□□□□ 0.56
TNRC6B-208ENST00000489500 SPDYE2BA6NHP3 402 aa18.49■□□□□ 0.55
TNRC6B-208ENST00000489500 SPDYE6P0CI01 402 aa18.49■□□□□ 0.55
TNRC6B-208ENST00000489500 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
TNRC6B-208ENST00000489500 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
TNRC6B-208ENST00000489500 PITPNM1O00562 1244 aa18.37■□□□□ 0.53
TNRC6B-208ENST00000489500 NACADO15069 1562 aa18.35■□□□□ 0.53
TNRC6B-208ENST00000489500 ZNF692Q9BU19 519 aaPredicted RBP18.34■□□□□ 0.53
TNRC6B-208ENST00000489500 SSUH2Q9Y2M2 353 aa18.31■□□□□ 0.52
TNRC6B-208ENST00000489500 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
TNRC6B-208ENST00000489500 PIP4P2Q8N4L2 257 aa18.23■□□□□ 0.51
TNRC6B-208ENST00000489500 FXR2P51116 673 aaKnown RBP eCLIP18.16■□□□□ 0.59e-9■■■■■ 37.2
TNRC6B-208ENST00000489500 SPDYE1Q8NFV5 336 aaPredicted RBP18.12■□□□□ 0.49
TNRC6B-208ENST00000489500 CLEC11AQ9Y240 323 aa18.12■□□□□ 0.49
TNRC6B-208ENST00000489500 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
TNRC6B-208ENST00000489500 PABPN1Q86U42 306 aaKnown RBP eCLIP18.1■□□□□ 0.49
TNRC6B-208ENST00000489500 UNC13AQ9UPW8 1703 aa17.99■□□□□ 0.47
TNRC6B-208ENST00000489500 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
TNRC6B-208ENST00000489500 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
TNRC6B-208ENST00000489500 PRKAR2AP13861 404 aaKnown RBP17.89■□□□□ 0.45
TNRC6B-208ENST00000489500 SPDYE4A6NLX3 237 aa17.88■□□□□ 0.45
TNRC6B-208ENST00000489500 HAX1O00165 279 aa17.83■□□□□ 0.44
TNRC6B-208ENST00000489500 PRR29P0C7W0 189 aa17.83■□□□□ 0.44
TNRC6B-208ENST00000489500 CHADLQ6NUI6 762 aa17.79■□□□□ 0.44
TNRC6B-208ENST00000489500 BICRAQ9NZM4 1560 aa17.77■□□□□ 0.44
TNRC6B-208ENST00000489500 SP7Q8TDD2 431 aaPredicted RBP17.74■□□□□ 0.43
TNRC6B-208ENST00000489500 EVX2Q03828 476 aa17.71■□□□□ 0.43
TNRC6B-208ENST00000489500 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
TNRC6B-208ENST00000489500 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
TNRC6B-208ENST00000489500 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
TNRC6B-208ENST00000489500 C19orf67A6NJJ6 358 aa17.57■□□□□ 0.4
TNRC6B-208ENST00000489500 FARP1Q9Y4F1 1045 aaPredicted RBP17.51■□□□□ 0.39
TNRC6B-208ENST00000489500 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
TNRC6B-208ENST00000489500 PROM2Q8N271 834 aa17.48■□□□□ 0.39
TNRC6B-208ENST00000489500 CC2D2AQ9P2K1 1620 aa17.41■□□□□ 0.38
TNRC6B-208ENST00000489500 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
TNRC6B-208ENST00000489500 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
TNRC6B-208ENST00000489500 CD44P16070 742 aaKnown RBP17.34■□□□□ 0.37
TNRC6B-208ENST00000489500 GABBR2O75899 941 aa17.26■□□□□ 0.35
TNRC6B-208ENST00000489500 FKBP8Q14318 412 aa17.26■□□□□ 0.35
TNRC6B-208ENST00000489500 MNX1P50219 401 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms