RNA–Protein interactions for RNA: ENST00000395038.6

SOS1-201, Transcript of SOS Ras/Rac guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SOS1, Length 4,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOS1-201ENST00000395038 NISCHQ9Y2I1 1504 aa13.31□□□□□ -0.28
SOS1-201ENST00000395038 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
SOS1-201ENST00000395038 ZCCHC6Q5VYS8 1495 aaKnown RBP11.28□□□□□ -0.6
SOS1-201ENST00000395038 SHROOM4Q9ULL8 1493 aa11.18□□□□□ -0.62
SOS1-201ENST00000395038 DCAF1Q9Y4B6 1507 aa10.98□□□□□ -0.65
SOS1-201ENST00000395038 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
SOS1-201ENST00000395038 DCAF8L2P0C7V8 631 aa10.78□□□□□ -0.68
SOS1-201ENST00000395038 MYO15BQ96JP2 1530 aa10.74□□□□□ -0.69
SOS1-201ENST00000395038 CHIC1Q5VXU3 224 aa10.72□□□□□ -0.69
SOS1-201ENST00000395038 ABCC9O60706 1549 aa10.65□□□□□ -0.7
SOS1-201ENST00000395038 SCRIBQ14160 1630 aa10.57□□□□□ -0.72
SOS1-201ENST00000395038 RSF1Q96T23 1441 aaPredicted RBP10.5□□□□□ -0.73
SOS1-201ENST00000395038 NACADO15069 1562 aa10.47□□□□□ -0.73
SOS1-201ENST00000395038 RB1CC1Q8TDY2 1594 aa10.41□□□□□ -0.74
SOS1-201ENST00000395038 HRCP23327 699 aa10.37□□□□□ -0.75
SOS1-201ENST00000395038 LOC105371045A0A1W2PR82 267 aa10.35□□□□□ -0.75
SOS1-201ENST00000395038 CECR2Q9BXF3 1484 aa10.35□□□□□ -0.75
SOS1-201ENST00000395038 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
SOS1-201ENST00000395038 UNC13AQ9UPW8 1703 aa10.32□□□□□ -0.76
SOS1-201ENST00000395038 PCGF6Q9BYE7 350 aa10.3□□□□□ -0.76
SOS1-201ENST00000395038 WIZO95785 1651 aa10.28□□□□□ -0.76
SOS1-201ENST00000395038 BAZ1AQ9NRL2 1556 aaPredicted RBP10.25□□□□□ -0.77
SOS1-201ENST00000395038 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
SOS1-201ENST00000395038 TRIM41Q8WV44 630 aa10.21□□□□□ -0.78
SOS1-201ENST00000395038 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
SOS1-201ENST00000395038 BICRAQ9NZM4 1560 aa10.15□□□□□ -0.78
SOS1-201ENST00000395038 SMARCA4P51532 1647 aa10.15□□□□□ -0.79
SOS1-201ENST00000395038 TOP2AP11388 1531 aaKnown RBP10.14□□□□□ -0.79
SOS1-201ENST00000395038 PPARGC1BQ86YN6 1023 aaKnown RBP10.11□□□□□ -0.79
SOS1-201ENST00000395038 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
SOS1-201ENST00000395038 FAM9AQ8IZU1 332 aaPredicted RBP10.08□□□□□ -0.8
SOS1-201ENST00000395038 CCDC88BA6NC98 1476 aa10.06□□□□□ -0.8
SOS1-201ENST00000395038 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
SOS1-201ENST00000395038 ABCC8Q09428 1581 aa10.02□□□□□ -0.81
SOS1-201ENST00000395038 PEG3Q9GZU2 1588 aa10□□□□□ -0.81
SOS1-201ENST00000395038 EHMT2Q96KQ7 1210 aa9.94□□□□□ -0.82
SOS1-201ENST00000395038 ZEB1P37275 1124 aaPredicted RBP9.91□□□□□ -0.82
SOS1-201ENST00000395038 SOGA1O94964 1423 aa9.91□□□□□ -0.82
SOS1-201ENST00000395038 WRNQ14191 1432 aaPredicted RBP eCLIP9.9□□□□□ -0.829e-6■■■■■ 50.1
SOS1-201ENST00000395038 RUSC2Q8N2Y8 1516 aa9.88□□□□□ -0.83
SOS1-201ENST00000395038 EEA1Q15075 1411 aa9.88□□□□□ -0.83
SOS1-201ENST00000395038 ATAD2BQ9ULI0 1458 aa9.86□□□□□ -0.83
SOS1-201ENST00000395038 TNIKQ9UKE5 1360 aa9.86□□□□□ -0.83
SOS1-201ENST00000395038 CEP162Q5TB80 1403 aa9.85□□□□□ -0.83
SOS1-201ENST00000395038 SYNJ1O43426 1573 aa9.84□□□□□ -0.83
SOS1-201ENST00000395038 CSRNP3Q8WYN3 585 aa9.8□□□□□ -0.84
SOS1-201ENST00000395038 BAZ1BQ9UIG0 1483 aaKnown RBP9.8□□□□□ -0.84
SOS1-201ENST00000395038 KIF21BO75037 1637 aa9.8□□□□□ -0.84
SOS1-201ENST00000395038 GOLGA3Q08378 1498 aa9.79□□□□□ -0.84
SOS1-201ENST00000395038 DNAJC5BQ9UF47 199 aa9.75□□□□□ -0.85
SOS1-201ENST00000395038 CEP164Q9UPV0 1460 aa9.74□□□□□ -0.85
SOS1-201ENST00000395038 TOP2BQ02880 1626 aa9.73□□□□□ -0.85
SOS1-201ENST00000395038 BIVM-ERCC5R4GMW8 1640 aa9.73□□□□□ -0.85
SOS1-201ENST00000395038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.85
SOS1-201ENST00000395038 HMGXB3Q12766 1538 aa9.71□□□□□ -0.86
SOS1-201ENST00000395038 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
SOS1-201ENST00000395038 NCAPD3P42695 1498 aa9.68□□□□□ -0.86
SOS1-201ENST00000395038 RAPGEF2Q9Y4G8 1499 aa9.68□□□□□ -0.86
SOS1-201ENST00000395038 CCER1Q8TC90 406 aaPredicted RBP9.66□□□□□ -0.86
SOS1-201ENST00000395038 CLIP1P30622 1438 aa9.66□□□□□ -0.86
SOS1-201ENST00000395038 VPS8Q8N3P4 1428 aa9.64□□□□□ -0.87
SOS1-201ENST00000395038 ERICH3Q5RHP9 1530 aa9.63□□□□□ -0.87
SOS1-201ENST00000395038 TTBK1Q5TCY1 1321 aaPredicted RBP9.63□□□□□ -0.87
SOS1-201ENST00000395038 CUX1P39880 1505 aa9.63□□□□□ -0.87
SOS1-201ENST00000395038 PRXQ9BXM0 1461 aa9.62□□□□□ -0.87
SOS1-201ENST00000395038 PRDM2Q13029 1718 aa9.6□□□□□ -0.87
SOS1-201ENST00000395038 CFTRP13569 1480 aa9.6□□□□□ -0.87
SOS1-201ENST00000395038 CC2D2AQ9P2K1 1620 aa9.58□□□□□ -0.88
SOS1-201ENST00000395038 ARAP1Q96P48 1450 aa9.57□□□□□ -0.88
SOS1-201ENST00000395038 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
SOS1-201ENST00000395038 KIF27Q86VH2 1401 aa9.52□□□□□ -0.89
SOS1-201ENST00000395038 DIEXFQ68CQ4 756 aaKnown RBP9.5□□□□□ -0.89
SOS1-201ENST00000395038 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
SOS1-201ENST00000395038 HNRNPUL2Q1KMD3 747 aaKnown RBP9.47□□□□□ -0.89
SOS1-201ENST00000395038 CADPSQ9ULU8 1353 aa9.45□□□□□ -0.9
SOS1-201ENST00000395038 ZNF316A6NFI3 1004 aaPredicted RBP9.45□□□□□ -0.9
SOS1-201ENST00000395038 RRBP1Q9P2E9 1410 aaKnown RBP9.45□□□□□ -0.9
SOS1-201ENST00000395038 RANGAP1P46060 587 aaPredicted RBP9.44□□□□□ -0.9
SOS1-201ENST00000395038 APLP2Q06481 763 aa9.44□□□□□ -0.9
SOS1-201ENST00000395038 ACIN1Q9UKV3 1341 aaKnown RBP9.44□□□□□ -0.9
SOS1-201ENST00000395038 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
SOS1-201ENST00000395038 IGF1RP08069 1367 aa9.44□□□□□ -0.9
SOS1-201ENST00000395038 NEUROD1Q13562 356 aa9.43□□□□□ -0.9
SOS1-201ENST00000395038 NESP48681 1621 aa9.43□□□□□ -0.9
SOS1-201ENST00000395038 CUX2O14529 1486 aa9.43□□□□□ -0.9
SOS1-201ENST00000395038 FGD5Q6ZNL6 1462 aa9.42□□□□□ -0.9
SOS1-201ENST00000395038 DHX57Q6P158 1386 aaKnown RBP9.41□□□□□ -0.9
SOS1-201ENST00000395038 MAP3K1Q13233 1512 aa9.4□□□□□ -0.91
SOS1-201ENST00000395038 CLSPNQ9HAW4 1339 aa9.39□□□□□ -0.91
SOS1-201ENST00000395038 TIAM1Q13009 1591 aa9.38□□□□□ -0.91
SOS1-201ENST00000395038 CARMIL1Q5VZK9 1371 aa9.37□□□□□ -0.91
SOS1-201ENST00000395038 FANCD2Q9BXW9 1451 aa9.36□□□□□ -0.91
SOS1-201ENST00000395038 DNMBPQ6XZF7 1577 aa9.36□□□□□ -0.91
SOS1-201ENST00000395038 CFAP43Q8NDM7 1665 aa9.35□□□□□ -0.91
SOS1-201ENST00000395038 CCNB3Q8WWL7 1395 aa9.35□□□□□ -0.91
SOS1-201ENST00000395038 ABCA10Q8WWZ4 1543 aa9.34□□□□□ -0.91
SOS1-201ENST00000395038 TOPBP1Q92547 1522 aa9.33□□□□□ -0.92
SOS1-201ENST00000395038 WDR97A6NE52 1622 aa9.33□□□□□ -0.92
SOS1-201ENST00000395038 CENPBP07199 599 aaPredicted RBP9.33□□□□□ -0.92
SOS1-201ENST00000395038 PCF11O94913 1555 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms