Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SNX27Q96L92 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SNX27Q96L92 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SNX27Q96L92 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.82■□□□□ 0.12
SNX27Q96L92 RN7SKP214-201ENST00000364208 315 ntBASIC15.82■□□□□ 0.12
SNX27Q96L92 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SNX27Q96L92 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.82■□□□□ 0.12
SNX27Q96L92 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SNX27Q96L92 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.82■□□□□ 0.12
SNX27Q96L92 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.82■□□□□ 0.12
SNX27Q96L92 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 RN7SL11P-201ENST00000471305 293 ntBASIC15.82■□□□□ 0.12
SNX27Q96L92 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.82■□□□□ 0.12
SNX27Q96L92 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.82■□□□□ 0.12
SNX27Q96L92 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SNX27Q96L92 PRKXP1-201ENST00000561423 1122 ntBASIC15.82■□□□□ 0.12
SNX27Q96L92 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.82■□□□□ 0.12
SNX27Q96L92 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.82■□□□□ 0.12
SNX27Q96L92 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.82■□□□□ 0.12
SNX27Q96L92 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SNX27Q96L92 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SNX27Q96L92 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SNX27Q96L92 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SNX27Q96L92 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.82■□□□□ 0.12
SNX27Q96L92 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SNX27Q96L92 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNX27Q96L92 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SNX27Q96L92 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 AC008132.1-202ENST00000342005 1389 ntBASIC15.81■□□□□ 0.12
SNX27Q96L92 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.81■□□□□ 0.12
SNX27Q96L92 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.81■□□□□ 0.12
SNX27Q96L92 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX27Q96L92 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SNX27Q96L92 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNX27Q96L92 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
SNX27Q96L92 AL122018.1-201ENST00000446607 2310 ntBASIC15.81■□□□□ 0.12
SNX27Q96L92 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX27Q96L92 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.81■□□□□ 0.12
SNX27Q96L92 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.81■□□□□ 0.12
SNX27Q96L92 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.81■□□□□ 0.12
SNX27Q96L92 AC027237.1-201ENST00000560942 655 ntBASIC15.81■□□□□ 0.12
SNX27Q96L92 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX27Q96L92 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.81■□□□□ 0.12
SNX27Q96L92 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.81■□□□□ 0.12
SNX27Q96L92 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.81■□□□□ 0.12
SNX27Q96L92 AL157813.1-201ENST00000612996 587 ntBASIC15.81■□□□□ 0.12
SNX27Q96L92 AP001505.2-201ENST00000616815 443 ntBASIC15.81■□□□□ 0.12
SNX27Q96L92 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 AC011491.1-203ENST00000637688 543 ntBASIC15.81■□□□□ 0.12
SNX27Q96L92 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SNX27Q96L92 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.81■□□□□ 0.12
SNX27Q96L92 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNX27Q96L92 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.8■□□□□ 0.12
SNX27Q96L92 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNX27Q96L92 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms