Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
COLGALT1Q8NBJ5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 AL035414.1-201ENST00000451327 857 ntBASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 NPM1P43-201ENST00000558669 786 ntBASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 AC026803.1-201ENST00000569130 274 ntBASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 MEG3_2.1-201ENST00000611456 105 ntBASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 RN7SL736P-201ENST00000613111 269 ntBASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COLGALT1Q8NBJ5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 AC131206.1-201ENST00000538078 1211 ntBASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 FAM90A2P-201ENST00000511144 1395 ntBASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 FAM90A25P-201ENST00000528404 1395 ntBASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 CAP2P1-201ENST00000557743 1390 ntBASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 CYP4F23P-201ENST00000593402 1579 ntBASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.82■□□□□ 0.12
COLGALT1Q8NBJ5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COLGALT1Q8NBJ5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms