Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 AC015818.8-201ENST00000587907 1519 ntBASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 CHMP1AP1-201ENST00000445563 662 ntBASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ALG3P1-201ENST00000508806 1114 ntBASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 FAM86HP-204ENST00000513466 959 ntBASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 AC244157.2-201ENST00000616239 1006 ntBASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC39BQ5VTQ0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 AL023775.1-201ENST00000454907 1746 ntBASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 AC015802.1-201ENST00000588104 1449 ntBASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 BRWD1P1-201ENST00000401091 371 ntBASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 MTX1P1-201ENST00000440904 838 ntBASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 RPL13AP20-201ENST00000459725 609 ntBASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 AC002472.3-201ENST00000640124 621 ntBASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms