RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 NISCHQ9Y2I1 1504 aa37.58■■■■□ 3.61
SNHG9-201ENST00000531523 CCDC180Q9P1Z9 1646 aa33.72■■■□□ 2.99
SNHG9-201ENST00000531523 ABCC9O60706 1549 aa33.41■■■□□ 2.94
SNHG9-201ENST00000531523 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
SNHG9-201ENST00000531523 NACADO15069 1562 aa31.76■■■□□ 2.67
SNHG9-201ENST00000531523 MYO15BQ96JP2 1530 aa31.42■■■□□ 2.62
SNHG9-201ENST00000531523 UNC13AQ9UPW8 1703 aa31.38■■■□□ 2.61
SNHG9-201ENST00000531523 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
SNHG9-201ENST00000531523 ZCCHC6Q5VYS8 1495 aaKnown RBP31.23■■■□□ 2.59
SNHG9-201ENST00000531523 DNAJC5BQ9UF47 199 aa31.18■■■□□ 2.58
SNHG9-201ENST00000531523 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
SNHG9-201ENST00000531523 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
SNHG9-201ENST00000531523 PABPN1Q86U42 306 aaKnown RBP eCLIP31.05■■■□□ 2.56
SNHG9-201ENST00000531523 SCRIBQ14160 1630 aa30.68■■■□□ 2.5
SNHG9-201ENST00000531523 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
SNHG9-201ENST00000531523 CC2D2AQ9P2K1 1620 aa30.26■■■□□ 2.44
SNHG9-201ENST00000531523 EIF4G1Q04637 1599 aaKnown RBP30.25■■■□□ 2.43
SNHG9-201ENST00000531523 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
SNHG9-201ENST00000531523 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
SNHG9-201ENST00000531523 NCAPD3P42695 1498 aa29.29■■■□□ 2.28
SNHG9-201ENST00000531523 ATAD2BQ9ULI0 1458 aa29.24■■■□□ 2.27
SNHG9-201ENST00000531523 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
SNHG9-201ENST00000531523 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
SNHG9-201ENST00000531523 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
SNHG9-201ENST00000531523 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
SNHG9-201ENST00000531523 MROH2BQ7Z745 1585 aa28.98■■■□□ 2.23
SNHG9-201ENST00000531523 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
SNHG9-201ENST00000531523 NESP48681 1621 aa28.8■■■□□ 2.2
SNHG9-201ENST00000531523 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
SNHG9-201ENST00000531523 CUX2O14529 1486 aa28.75■■■□□ 2.19
SNHG9-201ENST00000531523 WIZO95785 1651 aa28.66■■■□□ 2.18
SNHG9-201ENST00000531523 LAMC3Q9Y6N6 1575 aa28.64■■■□□ 2.18
SNHG9-201ENST00000531523 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
SNHG9-201ENST00000531523 KIF21AQ7Z4S6 1674 aa28.51■■■□□ 2.16
SNHG9-201ENST00000531523 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
SNHG9-201ENST00000531523 RSF1Q96T23 1441 aaPredicted RBP28.4■■■□□ 2.14
SNHG9-201ENST00000531523 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
SNHG9-201ENST00000531523 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
SNHG9-201ENST00000531523 TOP2AP11388 1531 aaKnown RBP28.29■■■□□ 2.12
SNHG9-201ENST00000531523 MRC2Q9UBG0 1479 aa28.18■■■□□ 2.1
SNHG9-201ENST00000531523 WDR62O43379 1518 aa28.17■■■□□ 2.1
SNHG9-201ENST00000531523 CFTRP13569 1480 aa28.15■■■□□ 2.1
SNHG9-201ENST00000531523 CEP164Q9UPV0 1460 aa28.08■■■□□ 2.09
SNHG9-201ENST00000531523 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
SNHG9-201ENST00000531523 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
SNHG9-201ENST00000531523 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
SNHG9-201ENST00000531523 URB2Q14146 1524 aaKnown RBP27.89■■■□□ 2.06
SNHG9-201ENST00000531523 TOPBP1Q92547 1522 aa27.6■■■□□ 2.01
SNHG9-201ENST00000531523 DNMBPQ6XZF7 1577 aa27.53■■■□□ 2
SNHG9-201ENST00000531523 IFT140Q96RY7 1462 aa27.51■■■□□ 2
SNHG9-201ENST00000531523 ZNF608Q9ULD9 1512 aaPredicted RBP27.5■■□□□ 1.99
SNHG9-201ENST00000531523 ABCC8Q09428 1581 aa27.48■■□□□ 1.99
SNHG9-201ENST00000531523 EIF4G3O43432 1585 aaKnown RBP27.41■■□□□ 1.98
SNHG9-201ENST00000531523 TARBP1Q13395 1621 aaKnown RBP27.41■■□□□ 1.98
SNHG9-201ENST00000531523 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
SNHG9-201ENST00000531523 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
SNHG9-201ENST00000531523 CUX1P39880 1505 aa27.22■■□□□ 1.95
SNHG9-201ENST00000531523 AQRO60306 1485 aaKnown RBP eCLIP27.2■■□□□ 1.95
SNHG9-201ENST00000531523 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
SNHG9-201ENST00000531523 CHD1O14646 1710 aa27.19■■□□□ 1.94
SNHG9-201ENST00000531523 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
SNHG9-201ENST00000531523 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
SNHG9-201ENST00000531523 RIMBP3CA6NJZ7 1639 aa27.14■■□□□ 1.94
SNHG9-201ENST00000531523 RIMBP3BA6NNM3 1639 aa27.14■■□□□ 1.94
SNHG9-201ENST00000531523 RIMBP3Q9UFD9 1639 aa27.14■■□□□ 1.94
SNHG9-201ENST00000531523 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
SNHG9-201ENST00000531523 SOGA1O94964 1423 aa27.11■■□□□ 1.93
SNHG9-201ENST00000531523 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
SNHG9-201ENST00000531523 TDRD9Q8NDG6 1382 aaKnown RBP27.04■■□□□ 1.92
SNHG9-201ENST00000531523 ARHGEF11O15085 1522 aa27.04■■□□□ 1.92
SNHG9-201ENST00000531523 SNAPC4Q5SXM2 1469 aa26.99■■□□□ 1.91
SNHG9-201ENST00000531523 PBRM1Q86U86 1689 aa26.94■■□□□ 1.9
SNHG9-201ENST00000531523 MAGI1Q96QZ7 1491 aaPredicted RBP26.91■■□□□ 1.9
SNHG9-201ENST00000531523 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
SNHG9-201ENST00000531523 GRIN2BQ13224 1484 aa26.9■■□□□ 1.9
SNHG9-201ENST00000531523 ABCA10Q8WWZ4 1543 aa26.89■■□□□ 1.89
SNHG9-201ENST00000531523 BIVM-ERCC5R4GMW8 1640 aa26.88■■□□□ 1.89
SNHG9-201ENST00000531523 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
SNHG9-201ENST00000531523 TOP2BQ02880 1626 aa26.83■■□□□ 1.89
SNHG9-201ENST00000531523 GAPVD1Q14C86 1478 aa26.83■■□□□ 1.89
SNHG9-201ENST00000531523 SYNJ1O43426 1573 aa26.83■■□□□ 1.89
SNHG9-201ENST00000531523 FBLN2P98095 1184 aa26.82■■□□□ 1.88
SNHG9-201ENST00000531523 ARAP1Q96P48 1450 aa26.81■■□□□ 1.88
SNHG9-201ENST00000531523 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
SNHG9-201ENST00000531523 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
SNHG9-201ENST00000531523 CHMP7Q8WUX9 453 aaPredicted RBP26.69■■□□□ 1.86
SNHG9-201ENST00000531523 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
SNHG9-201ENST00000531523 CYB5RLQ6IPT4 315 aa26.65■■□□□ 1.86
SNHG9-201ENST00000531523 GRIN2AQ12879 1464 aa26.59■■□□□ 1.85
SNHG9-201ENST00000531523 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
SNHG9-201ENST00000531523 CEP170Q5SW79 1584 aa26.55■■□□□ 1.84
SNHG9-201ENST00000531523 NUP160Q12769 1436 aa26.52■■□□□ 1.84
SNHG9-201ENST00000531523 FHAD1B1AJZ9 1412 aa26.49■■□□□ 1.83
SNHG9-201ENST00000531523 ERCC6L2Q5T890 1561 aa26.46■■□□□ 1.83
SNHG9-201ENST00000531523 SHROOM2Q13796 1616 aa26.45■■□□□ 1.82
SNHG9-201ENST00000531523 RUSC2Q8N2Y8 1516 aa26.3■■□□□ 1.8
SNHG9-201ENST00000531523 TRHP20396 242 aaPredicted RBP26.23■■□□□ 1.79
SNHG9-201ENST00000531523 CUL7Q14999 1698 aa26.22■■□□□ 1.79
SNHG9-201ENST00000531523 KIF27Q86VH2 1401 aa26.19■■□□□ 1.78
SNHG9-201ENST00000531523 IGF1RP08069 1367 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms