Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 BX640514.1-201ENST00000583223 1918 ntBASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 ACTG1P2-201ENST00000415776 1125 ntBASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 ACTG1P11-201ENST00000425411 1125 ntBASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 AC125604.1-201ENST00000496255 707 ntBASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 AC009779.1-201ENST00000551138 283 ntBASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 AL132994.2-201ENST00000603120 687 ntBASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 AC144522.1-201ENST00000625111 1658 ntBASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMG20BQ9P0W2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 PKD1P5-201ENST00000532415 10291 ntBASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 SLC25A24P2-201ENST00000415059 510 ntBASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 AC006122.1-201ENST00000493323 440 ntBASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 AP001267.2-201ENST00000532619 2086 ntBASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 AC015802.1-201ENST00000588104 1449 ntBASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMG20BQ9P0W2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.84■□□□□ 0.45
HMG20BQ9P0W2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms