Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 INE2-201ENST00000630399 1874 ntBASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 PCDHB18P-202ENST00000526308 3197 ntBASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SSBP4Q9BWG4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AC068760.1-201ENST00000493579 1953 ntBASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AL445209.1-201ENST00000607269 3491 ntBASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 USP9YP2-201ENST00000504503 1000 ntBASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 USP9YP1-201ENST00000513521 1002 ntBASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 AL354702.1-201ENST00000442006 1960 ntBASIC11.27□□□□□ -0.61
SSBP4Q9BWG4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 AL353705.2-201ENST00000428243 662 ntBASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 SDR42E1P3-201ENST00000438345 502 ntBASIC11.26□□□□□ -0.61
SSBP4Q9BWG4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms