RNA–Protein interactions for RNA: ENST00000408941.7

SCP2-205, Transcript of sterol carrier protein 2, humanhuman

TSL 2 BASIC

Gene SCP2, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-205ENST00000408941 AEBP2Q6ZN18 517 aaPredicted RBP36.54■■■■□ 3.44
SCP2-205ENST00000408941 CHIC1Q5VXU3 224 aa35.24■■■■□ 3.23
SCP2-205ENST00000408941 SENP3Q9H4L4 574 aaPredicted RBP31.05■■■□□ 2.56
SCP2-205ENST00000408941 PHF23Q9BUL5 403 aaPredicted RBP30.97■■■□□ 2.55
SCP2-205ENST00000408941 FOXD1Q16676 465 aa28.89■■■□□ 2.22
SCP2-205ENST00000408941 PLPPR3Q6T4P5 718 aa28.42■■■□□ 2.14
SCP2-205ENST00000408941 PPP6R1Q9UPN7 881 aa27.48■■□□□ 1.99
SCP2-205ENST00000408941 ADRA2BP18089 450 aa27.42■■□□□ 1.98
SCP2-205ENST00000408941 PIAS4Q8N2W9 510 aaPredicted RBP27.12■■□□□ 1.93
SCP2-205ENST00000408941 MSH5O43196 834 aa26.79■■□□□ 1.88
SCP2-205ENST00000408941 POTEDQ86YR6 584 aa25.19■■□□□ 1.62
SCP2-205ENST00000408941 SCAF1Q9H7N4 1312 aaKnown RBP25.07■■□□□ 1.6
SCP2-205ENST00000408941 MAPK8IP2Q13387 824 aaPredicted RBP25.02■■□□□ 1.6
SCP2-205ENST00000408941 PPP4R3CPQ6ZMV5 832 aa25■■□□□ 1.59
SCP2-205ENST00000408941 DMRT2Q9Y5R5 561 aa24.73■■□□□ 1.55
SCP2-205ENST00000408941 CNKSR2Q8WXI2 1034 aa24.39■■□□□ 1.49
SCP2-205ENST00000408941 NCBP3Q53F19 620 aaKnown RBP24.2■■□□□ 1.46
SCP2-205ENST00000408941 HOXD11P31277 338 aaPredicted RBP24.05■■□□□ 1.44
SCP2-205ENST00000408941 RNF216Q9NWF9 866 aaPredicted RBP24.02■■□□□ 1.44
SCP2-205ENST00000408941 KCNA4P22459 653 aa23.92■■□□□ 1.42
SCP2-205ENST00000408941 NPM3O75607 178 aaKnown RBP23.86■■□□□ 1.41
SCP2-205ENST00000408941 DCAF8L1A6NGE4 600 aa23.67■■□□□ 1.38
SCP2-205ENST00000408941 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
SCP2-205ENST00000408941 RNF39Q9H2S5 420 aa22.93■■□□□ 1.26
SCP2-205ENST00000408941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.91■■□□□ 1.268e-10■□□□□ 9.9
SCP2-205ENST00000408941 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
SCP2-205ENST00000408941 SLC4A2P04920 1241 aa22.65■■□□□ 1.22
SCP2-205ENST00000408941 CACNB1Q02641 598 aaPredicted RBP22.65■■□□□ 1.22
SCP2-205ENST00000408941 C1QBPQ07021 282 aaKnown RBP22.62■■□□□ 1.21
SCP2-205ENST00000408941 U3KPZ7 1027 aaPredicted RBP22.49■■□□□ 1.19
SCP2-205ENST00000408941 FOXD4L1Q9NU39 408 aa22.12■■□□□ 1.13
SCP2-205ENST00000408941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.04■■□□□ 1.12
SCP2-205ENST00000408941 MYCNP04198 464 aaPredicted RBP22.04■■□□□ 1.12
SCP2-205ENST00000408941 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
SCP2-205ENST00000408941 ZBTB22O15209 634 aa22■■□□□ 1.11
SCP2-205ENST00000408941 SPINK5Q9NQ38 1064 aaPredicted RBP22■■□□□ 1.11
SCP2-205ENST00000408941 SAMD1Q6SPF0 538 aaPredicted RBP21.95■■□□□ 1.1
SCP2-205ENST00000408941 CAPN15O75808 1086 aa21.92■■□□□ 1.1
SCP2-205ENST00000408941 APLP2Q06481 763 aa21.9■■□□□ 1.1
SCP2-205ENST00000408941 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
SCP2-205ENST00000408941 ZNF219Q9P2Y4 722 aaPredicted RBP21.68■■□□□ 1.06
SCP2-205ENST00000408941 DSG3P32926 999 aa21.67■■□□□ 1.06
SCP2-205ENST00000408941 EHMT2Q96KQ7 1210 aa21.53■■□□□ 1.04
SCP2-205ENST00000408941 CSRNP3Q8WYN3 585 aa21.52■■□□□ 1.04
SCP2-205ENST00000408941 ATF5Q9Y2D1 282 aaPredicted RBP21.51■■□□□ 1.03
SCP2-205ENST00000408941 ABCB7O75027 752 aa21.47■■□□□ 1.03
SCP2-205ENST00000408941 ATXN8OSP0DMR3 200 aa21.4■■□□□ 1.02
SCP2-205ENST00000408941 POLA2Q14181 598 aa21.28■■□□□ 1
SCP2-205ENST00000408941 ZBTB12Q9Y330 459 aaPredicted RBP20.86■□□□□ 0.93
SCP2-205ENST00000408941 RBM42Q9BTD8 480 aaKnown RBP20.64■□□□□ 0.89
SCP2-205ENST00000408941 FBLN2P98095 1184 aa20.62■□□□□ 0.89
SCP2-205ENST00000408941 MKRN4PQ13434 485 aaPredicted RBP20.55■□□□□ 0.88
SCP2-205ENST00000408941 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
SCP2-205ENST00000408941 AKT1S1Q96B36 256 aa20.31■□□□□ 0.84
SCP2-205ENST00000408941 SPDYE2BA6NHP3 402 aa20.28■□□□□ 0.84
SCP2-205ENST00000408941 SPDYE6P0CI01 402 aa20.28■□□□□ 0.84
SCP2-205ENST00000408941 SPDYE2Q495Y8 402 aa20.28■□□□□ 0.84
SCP2-205ENST00000408941 ZNF692Q9BU19 519 aaPredicted RBP20.14■□□□□ 0.81
SCP2-205ENST00000408941 REM2Q8IYK8 340 aaPredicted RBP20.13■□□□□ 0.81
SCP2-205ENST00000408941 SSUH2Q9Y2M2 353 aa20.08■□□□□ 0.81
SCP2-205ENST00000408941 CHRDL2Q6WN34 429 aa19.97■□□□□ 0.79
SCP2-205ENST00000408941 PITPNM1O00562 1244 aa19.89■□□□□ 0.77
SCP2-205ENST00000408941 SPDYE4A6NLX3 237 aa19.87■□□□□ 0.77
SCP2-205ENST00000408941 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
SCP2-205ENST00000408941 POTEHQ6S545 545 aa19.85■□□□□ 0.77
SCP2-205ENST00000408941 SPDYE1Q8NFV5 336 aaPredicted RBP19.79■□□□□ 0.76
SCP2-205ENST00000408941 CLEC11AQ9Y240 323 aa19.73■□□□□ 0.75
SCP2-205ENST00000408941 PIP4P2Q8N4L2 257 aa19.64■□□□□ 0.73
SCP2-205ENST00000408941 FXR2P51116 673 aaKnown RBP eCLIP19.62■□□□□ 0.73
SCP2-205ENST00000408941 PRR29P0C7W0 189 aa19.5■□□□□ 0.71
SCP2-205ENST00000408941 PROM2Q8N271 834 aa19.47■□□□□ 0.71
SCP2-205ENST00000408941 FKBP8Q14318 412 aa19.46■□□□□ 0.71
SCP2-205ENST00000408941 STAG3Q9UJ98 1225 aa19.44■□□□□ 0.7
SCP2-205ENST00000408941 PRKAR2AP13861 404 aaKnown RBP19.39■□□□□ 0.69
SCP2-205ENST00000408941 CHADLQ6NUI6 762 aa19.29■□□□□ 0.68
SCP2-205ENST00000408941 CREBZFQ9NS37 354 aa19.15■□□□□ 0.66
SCP2-205ENST00000408941 HAX1O00165 279 aa19.12■□□□□ 0.65
SCP2-205ENST00000408941 FARP1Q9Y4F1 1045 aaPredicted RBP19.07■□□□□ 0.64
SCP2-205ENST00000408941 C19orf67A6NJJ6 358 aa18.97■□□□□ 0.63
SCP2-205ENST00000408941 EVX2Q03828 476 aa18.95■□□□□ 0.62
SCP2-205ENST00000408941 MIER1Q8N108 512 aa18.9■□□□□ 0.62
SCP2-205ENST00000408941 MNX1P50219 401 aaPredicted RBP18.89■□□□□ 0.61
SCP2-205ENST00000408941 FBXO3Q9UK99 471 aa18.89■□□□□ 0.61
SCP2-205ENST00000408941 SP7Q8TDD2 431 aaPredicted RBP18.87■□□□□ 0.61
SCP2-205ENST00000408941 PLEKHG5O94827 1062 aa18.81■□□□□ 0.6
SCP2-205ENST00000408941 NPM1P06748 294 aaKnown RBP eCLIP18.81■□□□□ 0.6
SCP2-205ENST00000408941 CD44P16070 742 aaKnown RBP18.8■□□□□ 0.6
SCP2-205ENST00000408941 PLCD3Q8N3E9 789 aa18.8■□□□□ 0.6
SCP2-205ENST00000408941 VASPP50552 380 aaPredicted RBP18.64■□□□□ 0.57
SCP2-205ENST00000408941 ZRANB1Q9UGI0 708 aa18.64■□□□□ 0.57
SCP2-205ENST00000408941 ZBTB47Q9UFB7 747 aaPredicted RBP18.6■□□□□ 0.57
SCP2-205ENST00000408941 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
SCP2-205ENST00000408941 GABBR2O75899 941 aa18.55■□□□□ 0.56
SCP2-205ENST00000408941 ZNF579Q8NAF0 562 aaKnown RBP18.54■□□□□ 0.56
SCP2-205ENST00000408941 TSPYL2Q9H2G4 693 aaPredicted RBP18.49■□□□□ 0.55
SCP2-205ENST00000408941 RASEFQ8IZ41 740 aa18.48■□□□□ 0.55
SCP2-205ENST00000408941 NUBP1P53384 320 aa18.47■□□□□ 0.55
SCP2-205ENST00000408941 CLCN6P51797 869 aa18.44■□□□□ 0.54
SCP2-205ENST00000408941 KLHL34Q8N239 644 aa18.44■□□□□ 0.54
SCP2-205ENST00000408941 PHF12Q96QT6 1004 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms