Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 MIR661-201ENST00000384842 89 ntBASIC14.22□□□□□ -0.13
RFTN2Q52LD8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 MIR6074-201ENST00000612054 107 ntBASIC14.22□□□□□ -0.13
RFTN2Q52LD8 WFDC1-204ENST00000613603 549 ntBASIC14.22□□□□□ -0.13
RFTN2Q52LD8 AJ011932.1-201ENST00000621707 465 ntBASIC14.22□□□□□ -0.13
RFTN2Q52LD8 CU634019.7-201ENST00000624153 1185 ntBASIC14.22□□□□□ -0.13
RFTN2Q52LD8 FP236241.2-201ENST00000624906 1185 ntBASIC14.22□□□□□ -0.13
RFTN2Q52LD8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFTN2Q52LD8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 MIR770-201ENST00000390219 98 ntBASIC14.21□□□□□ -0.13
RFTN2Q52LD8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 AL162726.2-201ENST00000438986 1017 ntBASIC14.21□□□□□ -0.13
RFTN2Q52LD8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 AC008494.3-201ENST00000606615 944 ntBASIC14.21□□□□□ -0.13
RFTN2Q52LD8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RFTN2Q52LD8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
RFTN2Q52LD8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
RFTN2Q52LD8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.21□□□□□ -0.14
RFTN2Q52LD8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
RFTN2Q52LD8 KRT8P24-201ENST00000560290 1559 ntBASIC14.21□□□□□ -0.14
RFTN2Q52LD8 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RFTN2Q52LD8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RFTN2Q52LD8 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
RFTN2Q52LD8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RFTN2Q52LD8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 CLUHP2-201ENST00000426660 1303 ntBASIC14.2□□□□□ -0.14
RFTN2Q52LD8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 HSPA8P5-201ENST00000456928 2069 ntBASIC14.2□□□□□ -0.14
RFTN2Q52LD8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 AC103988.2-201ENST00000561804 725 ntBASIC14.2□□□□□ -0.14
RFTN2Q52LD8 LINC02560-201ENST00000596379 459 ntBASIC14.2□□□□□ -0.14
RFTN2Q52LD8 AC138696.2-201ENST00000607376 223 ntBASIC14.2□□□□□ -0.14
RFTN2Q52LD8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RFTN2Q52LD8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms