Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.2□□□□□ -0.14
SH3BGRP55822 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC14.2□□□□□ -0.14
SH3BGRP55822 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.2□□□□□ -0.14
SH3BGRP55822 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.2□□□□□ -0.14
SH3BGRP55822 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.2□□□□□ -0.14
SH3BGRP55822 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.2□□□□□ -0.14
SH3BGRP55822 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SH3BGRP55822 AC105021.1-202ENST00000570572 669 ntBASIC14.2□□□□□ -0.14
SH3BGRP55822 MIR4453-201ENST00000584019 89 ntBASIC14.2□□□□□ -0.14
SH3BGRP55822 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.2□□□□□ -0.14
SH3BGRP55822 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SH3BGRP55822 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SH3BGRP55822 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SH3BGRP55822 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SH3BGRP55822 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SH3BGRP55822 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.2□□□□□ -0.14
SH3BGRP55822 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SH3BGRP55822 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.2□□□□□ -0.14
SH3BGRP55822 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SH3BGRP55822 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.19□□□□□ -0.14
SH3BGRP55822 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.19□□□□□ -0.14
SH3BGRP55822 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.19□□□□□ -0.14
SH3BGRP55822 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SH3BGRP55822 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SH3BGRP55822 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.19□□□□□ -0.14
SH3BGRP55822 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.19□□□□□ -0.14
SH3BGRP55822 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.19□□□□□ -0.14
SH3BGRP55822 AC107890.1-201ENST00000422478 521 ntBASIC14.19□□□□□ -0.14
SH3BGRP55822 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.19□□□□□ -0.14
SH3BGRP55822 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.19□□□□□ -0.14
SH3BGRP55822 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.19□□□□□ -0.14
SH3BGRP55822 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.19□□□□□ -0.14
SH3BGRP55822 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.19□□□□□ -0.14
SH3BGRP55822 AC051619.7-201ENST00000568314 623 ntBASIC14.19□□□□□ -0.14
SH3BGRP55822 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 AC016397.2-201ENST00000624848 1985 ntBASIC14.19□□□□□ -0.14
SH3BGRP55822 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SH3BGRP55822 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.19□□□□□ -0.14
SH3BGRP55822 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SH3BGRP55822 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SH3BGRP55822 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SH3BGRP55822 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.18□□□□□ -0.14
SH3BGRP55822 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.18□□□□□ -0.14
SH3BGRP55822 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SH3BGRP55822 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SH3BGRP55822 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms