RNA–Protein interactions for RNA: ENST00000311180.8

PDE12-201, Transcript of phosphodiesterase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE12, Length 8,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-201ENST00000311180 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
PDE12-201ENST00000311180 MYT1Q01538 1121 aa19.75■□□□□ 0.75
PDE12-201ENST00000311180 CCER1Q8TC90 406 aaPredicted RBP19.31■□□□□ 0.68
PDE12-201ENST00000311180 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
PDE12-201ENST00000311180 ERICH6Q7L0X2 663 aa19.12■□□□□ 0.65
PDE12-201ENST00000311180 CENPBP07199 599 aaPredicted RBP19.03■□□□□ 0.64
PDE12-201ENST00000311180 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
PDE12-201ENST00000311180 APLP2Q06481 763 aa18.76■□□□□ 0.59
PDE12-201ENST00000311180 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
PDE12-201ENST00000311180 YTHDC1Q96MU7 727 aaKnown RBP18.72■□□□□ 0.59
PDE12-201ENST00000311180 NEFLP07196 543 aa18.56■□□□□ 0.56
PDE12-201ENST00000311180 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
PDE12-201ENST00000311180 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.53
PDE12-201ENST00000311180 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
PDE12-201ENST00000311180 DAXXQ9UER7 740 aaPredicted RBP18.24■□□□□ 0.51
PDE12-201ENST00000311180 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
PDE12-201ENST00000311180 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
PDE12-201ENST00000311180 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
PDE12-201ENST00000311180 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
PDE12-201ENST00000311180 ZNF316A6NFI3 1004 aaPredicted RBP17.71■□□□□ 0.43
PDE12-201ENST00000311180 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
PDE12-201ENST00000311180 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
PDE12-201ENST00000311180 HRCP23327 699 aa17.52■□□□□ 0.39
PDE12-201ENST00000311180 GLIPR1L2Q4G1C9 344 aa17.47■□□□□ 0.39
PDE12-201ENST00000311180 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
PDE12-201ENST00000311180 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.38
PDE12-201ENST00000311180 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.37
PDE12-201ENST00000311180 MYT1LQ9UL68 1186 aa17.35■□□□□ 0.37
PDE12-201ENST00000311180 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
PDE12-201ENST00000311180 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
PDE12-201ENST00000311180 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
PDE12-201ENST00000311180 ANP32BQ92688 251 aaKnown RBP17.16■□□□□ 0.34
PDE12-201ENST00000311180 ANP32AP39687 249 aaKnown RBP17.1■□□□□ 0.33
PDE12-201ENST00000311180 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
PDE12-201ENST00000311180 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
PDE12-201ENST00000311180 EIF5BO60841 1220 aaKnown RBP16.98■□□□□ 0.31
PDE12-201ENST00000311180 GTF3C3Q9Y5Q9 886 aa16.96■□□□□ 0.31
PDE12-201ENST00000311180 ANP32CO43423 234 aa16.9■□□□□ 0.3
PDE12-201ENST00000311180 ITGAEP38570 1179 aa16.81■□□□□ 0.28
PDE12-201ENST00000311180 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
PDE12-201ENST00000311180 UPF2Q9HAU5 1272 aaKnown RBP16.79■□□□□ 0.28
PDE12-201ENST00000311180 NEFMP07197 916 aa16.79■□□□□ 0.28
PDE12-201ENST00000311180 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
PDE12-201ENST00000311180 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
PDE12-201ENST00000311180 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
PDE12-201ENST00000311180 TNNT2P45379 298 aaPredicted RBP16.75■□□□□ 0.27
PDE12-201ENST00000311180 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
PDE12-201ENST00000311180 HSP90AA1P07900 732 aaKnown RBP16.73■□□□□ 0.27
PDE12-201ENST00000311180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
PDE12-201ENST00000311180 BCANQ96GW7 911 aa16.68■□□□□ 0.26
PDE12-201ENST00000311180 ANP32EQ9BTT0 268 aa16.67■□□□□ 0.26
PDE12-201ENST00000311180 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
PDE12-201ENST00000311180 TRIM44Q96DX7 344 aaPredicted RBP16.53■□□□□ 0.24
PDE12-201ENST00000311180 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
PDE12-201ENST00000311180 NPM2Q86SE8 214 aaKnown RBP16.47■□□□□ 0.23
PDE12-201ENST00000311180 FAM50AQ14320 339 aaKnown RBP16.47■□□□□ 0.23
PDE12-201ENST00000311180 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
PDE12-201ENST00000311180 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
PDE12-201ENST00000311180 CDK11BP21127 795 aaKnown RBP16.43■□□□□ 0.22
PDE12-201ENST00000311180 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
PDE12-201ENST00000311180 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
PDE12-201ENST00000311180 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.42■□□□□ 0.22
PDE12-201ENST00000311180 NEUROD1Q13562 356 aa16.4■□□□□ 0.22
PDE12-201ENST00000311180 DDRGK1Q96HY6 314 aa16.39■□□□□ 0.21
PDE12-201ENST00000311180 BECN1Q14457 450 aa16.38■□□□□ 0.21
PDE12-201ENST00000311180 GOLGA6L22H0YM25 854 aa16.35■□□□□ 0.21
PDE12-201ENST00000311180 FKBP8Q14318 412 aa16.35■□□□□ 0.21
PDE12-201ENST00000311180 NBR1Q14596 966 aa16.33■□□□□ 0.2
PDE12-201ENST00000311180 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
PDE12-201ENST00000311180 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
PDE12-201ENST00000311180 ZNF326Q5BKZ1 582 aaKnown RBP16.26■□□□□ 0.19
PDE12-201ENST00000311180 HNRNPUQ00839 825 aaKnown RBP eCLIP16.21■□□□□ 0.19
PDE12-201ENST00000311180 BCL11AQ9H165 835 aa16.2■□□□□ 0.18
PDE12-201ENST00000311180 MYH16Q9H6N6 1097 aa16.2■□□□□ 0.18
PDE12-201ENST00000311180 PPM1GO15355 546 aaPredicted RBP16.19■□□□□ 0.18
PDE12-201ENST00000311180 TONSLQ96HA7 1378 aa16.18■□□□□ 0.18
PDE12-201ENST00000311180 ZRSR1Q15695 479 aaKnown RBP16.16■□□□□ 0.18
PDE12-201ENST00000311180 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
PDE12-201ENST00000311180 NRDCO43847 1150 aa16.13■□□□□ 0.17
PDE12-201ENST00000311180 DNTTIP2Q5QJE6 756 aaKnown RBP16.13■□□□□ 0.17
PDE12-201ENST00000311180 PTMAP06454 111 aaKnown RBP16.13■□□□□ 0.17
PDE12-201ENST00000311180 GOLGA6L6A8MZA4 724 aa16.12■□□□□ 0.17
PDE12-201ENST00000311180 CHAF1AQ13111 956 aaPredicted RBP16.11■□□□□ 0.17
PDE12-201ENST00000311180 ARXQ96QS3 562 aa16.09■□□□□ 0.17
PDE12-201ENST00000311180 TMC1Q8TDI8 760 aa16.08■□□□□ 0.17
PDE12-201ENST00000311180 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.16
PDE12-201ENST00000311180 CASC1Q6TDU7 716 aa16.04■□□□□ 0.16
PDE12-201ENST00000311180 WDR43Q15061 677 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDE12-201ENST00000311180 L1TD1Q5T7N2 865 aaKnown RBP16.01■□□□□ 0.15
PDE12-201ENST00000311180 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
PDE12-201ENST00000311180 CCDC180Q9P1Z9 1646 aa15.93■□□□□ 0.14
PDE12-201ENST00000311180 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
PDE12-201ENST00000311180 MSNP26038 577 aaKnown RBP15.92■□□□□ 0.14
PDE12-201ENST00000311180 MRS2Q9HD23 443 aa15.91■□□□□ 0.14
PDE12-201ENST00000311180 CHMP4BQ9H444 224 aaKnown RBP15.9■□□□□ 0.14
PDE12-201ENST00000311180 PTMSP20962 102 aa15.9■□□□□ 0.14
PDE12-201ENST00000311180 NOP58Q9Y2X3 529 aaKnown RBP15.9■□□□□ 0.14
PDE12-201ENST00000311180 DDX10Q13206 875 aaKnown RBP15.88■□□□□ 0.13
PDE12-201ENST00000311180 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
PDE12-201ENST00000311180 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms