Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.5□□□□□ -0.25
HTR1AP08908 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 AP000437.1-201ENST00000624057 2085 ntBASIC13.5□□□□□ -0.25
HTR1AP08908 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HTR1AP08908 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.5□□□□□ -0.25
HTR1AP08908 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 DMBT1P1-203ENST00000636837 4628 ntBASIC13.5□□□□□ -0.25
HTR1AP08908 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HTR1AP08908 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.5□□□□□ -0.25
HTR1AP08908 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1AP08908 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HTR1AP08908 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
HTR1AP08908 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1AP08908 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1AP08908 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1AP08908 PGAM5P1-201ENST00000518923 814 ntBASIC13.49□□□□□ -0.25
HTR1AP08908 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.49□□□□□ -0.25
HTR1AP08908 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1AP08908 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1AP08908 AC025048.3-201ENST00000590609 569 ntBASIC13.49□□□□□ -0.25
HTR1AP08908 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 MIR6080-201ENST00000617359 66 ntBASIC13.49□□□□□ -0.25
HTR1AP08908 AC005702.4-201ENST00000618393 416 ntBASIC13.49□□□□□ -0.25
HTR1AP08908 AF228730.6-201ENST00000641497 218 ntBASIC13.49□□□□□ -0.25
HTR1AP08908 AC084121.3-201ENST00000641716 218 ntBASIC13.49□□□□□ -0.25
HTR1AP08908 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1AP08908 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1AP08908 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HTR1AP08908 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
HTR1AP08908 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1AP08908 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.49□□□□□ -0.25
HTR1AP08908 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.48□□□□□ -0.25
HTR1AP08908 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.48□□□□□ -0.25
HTR1AP08908 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HTR1AP08908 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
HTR1AP08908 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HTR1AP08908 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.48□□□□□ -0.25
HTR1AP08908 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HTR1AP08908 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.48□□□□□ -0.25
HTR1AP08908 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.48□□□□□ -0.25
HTR1AP08908 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.48□□□□□ -0.25
HTR1AP08908 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.48□□□□□ -0.25
HTR1AP08908 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HTR1AP08908 AC004461.1-201ENST00000412461 403 ntBASIC13.48□□□□□ -0.25
HTR1AP08908 GPS2P2-201ENST00000430745 888 ntBASIC13.48□□□□□ -0.25
HTR1AP08908 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HTR1AP08908 RPL13P2-201ENST00000440687 659 ntBASIC13.48□□□□□ -0.25
HTR1AP08908 POLD2P1-201ENST00000511220 997 ntBASIC13.48□□□□□ -0.25
HTR1AP08908 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.48□□□□□ -0.25
HTR1AP08908 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms