Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.11■□□□□ 0.65
BCL11BQ9C0K0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
BCL11BQ9C0K0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
BCL11BQ9C0K0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.11■□□□□ 0.65
BCL11BQ9C0K0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
BCL11BQ9C0K0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.11■□□□□ 0.65
BCL11BQ9C0K0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BCL11BQ9C0K0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
BCL11BQ9C0K0 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 AL365209.1-201ENST00000624418 6473 ntBASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 DUX4L50-201ENST00000455245 715 ntBASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 MIR3908-201ENST00000579798 126 ntBASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 AP000322.3-201ENST00000608665 388 ntBASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 AC011471.3-201ENST00000623576 402 ntBASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BCL11BQ9C0K0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM90A21P-201ENST00000510875 1396 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM90A15P-201ENST00000514465 1395 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM90A6P-201ENST00000515148 1394 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM90A16P-201ENST00000526662 1395 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM90A9P-201ENST00000527940 1395 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM90A5P-201ENST00000528738 1395 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM90A14P-201ENST00000530386 1395 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM90A13P-201ENST00000534703 1395 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 AC126755.1-201ENST00000525846 6405 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 COA4-204ENST00000541455 1038 ntTSL 5 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 MME-218ENST00000625667 363 ntTSL 5 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 REXO1L4P-201ENST00000605109 1937 ntBASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.09■□□□□ 0.65
BCL11BQ9C0K0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
BCL11BQ9C0K0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
BCL11BQ9C0K0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
BCL11BQ9C0K0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BCL11BQ9C0K0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.08■□□□□ 0.65
BCL11BQ9C0K0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BCL11BQ9C0K0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
BCL11BQ9C0K0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BCL11BQ9C0K0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BCL11BQ9C0K0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms