Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC33Q8N5R6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC33Q8N5R6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC33Q8N5R6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC33Q8N5R6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC33Q8N5R6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC33Q8N5R6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC33Q8N5R6 AP001267.2-201ENST00000532619 2086 ntBASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 AL021578.1-201ENST00000613646 709 ntBASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 AL096828.3-201ENST00000615354 462 ntBASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 PRSS30P-206ENST00000641773 873 ntBASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 KRT8P14-201ENST00000414254 1442 ntBASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC33Q8N5R6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 SLC25A24P2-201ENST00000415059 510 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 AC004945.1-201ENST00000416738 983 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 CD8B2-202ENST00000417670 633 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 NUS1P3-201ENST00000423502 862 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 CALR4P-201ENST00000431943 946 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 IGHJ2P-201ENST00000454480 60 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 ACTG1P17-201ENST00000558391 1119 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 AC244452.3-201ENST00000636814 210 ntBASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC33Q8N5R6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms