Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 KRT8P1-201ENST00000557533 1207 ntBASIC22.64■■□□□ 1.21
VPS8Q8N3P4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 MIR3907-201ENST00000579424 151 ntBASIC22.64■■□□□ 1.21
VPS8Q8N3P4 AC084346.2-201ENST00000607097 949 ntBASIC22.64■■□□□ 1.21
VPS8Q8N3P4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC22.63■■□□□ 1.21
VPS8Q8N3P4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 RPSAP15-201ENST00000448168 861 ntBASIC22.62■■□□□ 1.21
VPS8Q8N3P4 DUX4L50-201ENST00000455245 715 ntBASIC22.62■■□□□ 1.21
VPS8Q8N3P4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 RN7SL530P-201ENST00000485097 298 ntBASIC22.62■■□□□ 1.21
VPS8Q8N3P4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 AC009145.4-201ENST00000625119 1294 ntBASIC22.62■■□□□ 1.21
VPS8Q8N3P4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS8Q8N3P4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 LINC02228-204ENST00000642115 2962 ntBASIC22.61■■□□□ 1.21
VPS8Q8N3P4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 HLA-DQB2-229ENST00000411527 1059 ntBASIC22.61■■□□□ 1.21
VPS8Q8N3P4 BANF1P3-201ENST00000412556 261 ntBASIC22.61■■□□□ 1.21
VPS8Q8N3P4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS8Q8N3P4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 475.5 ms