Protein–RNA interactions for Protein: O43653

PSCA, Prostate stem cell antigen, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSCAO43653 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
PSCAO43653 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
PSCAO43653 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.12□□□□□ -0.79
PSCAO43653 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC10.12□□□□□ -0.79
PSCAO43653 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PSCAO43653 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.12□□□□□ -0.79
PSCAO43653 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC10.12□□□□□ -0.79
PSCAO43653 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
PSCAO43653 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 REXO1L5P-201ENST00000622260 2098 ntBASIC10.11□□□□□ -0.79
PSCAO43653 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 HLA-DQB2-231ENST00000435145 2026 ntBASIC10.11□□□□□ -0.79
PSCAO43653 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.11□□□□□ -0.79
PSCAO43653 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
PSCAO43653 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC10.11□□□□□ -0.79
PSCAO43653 SSR4P1-203ENST00000599569 2260 ntBASIC10.11□□□□□ -0.79
PSCAO43653 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
PSCAO43653 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 MIR1202-201ENST00000408529 83 ntBASIC10.11□□□□□ -0.79
PSCAO43653 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.11□□□□□ -0.79
PSCAO43653 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 AC007274.1-201ENST00000439805 662 ntBASIC10.11□□□□□ -0.79
PSCAO43653 AC245100.3-201ENST00000441281 285 ntBASIC10.11□□□□□ -0.79
PSCAO43653 CSF2RBP1-201ENST00000447905 391 ntBASIC10.11□□□□□ -0.79
PSCAO43653 AL590640.2-201ENST00000457038 527 ntBASIC10.11□□□□□ -0.79
PSCAO43653 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC10.11□□□□□ -0.79
PSCAO43653 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC10.11□□□□□ -0.79
PSCAO43653 SNX29P1-201ENST00000548357 1007 ntBASIC10.11□□□□□ -0.79
PSCAO43653 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 NAT9-222ENST00000583476 583 ntTSL 3 BASIC10.11□□□□□ -0.79
PSCAO43653 ECM1P1-201ENST00000604092 1279 ntBASIC10.11□□□□□ -0.79
PSCAO43653 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
PSCAO43653 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 AC023024.2-201ENST00000623561 1993 ntBASIC10.11□□□□□ -0.79
PSCAO43653 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 WASH3P-207ENST00000560956 1394 ntBASIC10.11□□□□□ -0.79
PSCAO43653 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.11□□□□□ -0.79
PSCAO43653 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
PSCAO43653 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PSCAO43653 STK33-217ENST00000534493 1895 ntTSL 2 BASIC10.1□□□□□ -0.79
PSCAO43653 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
PSCAO43653 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
PSCAO43653 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC10.1□□□□□ -0.79
PSCAO43653 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC10.1□□□□□ -0.79
PSCAO43653 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
PSCAO43653 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
PSCAO43653 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC10.1□□□□□ -0.79
PSCAO43653 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC10.1□□□□□ -0.79
PSCAO43653 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
PSCAO43653 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.1□□□□□ -0.79
PSCAO43653 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
PSCAO43653 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PSCAO43653 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.1□□□□□ -0.79
PSCAO43653 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms