RNA–Protein interactions for RNA: ENST00000273739.9

SLIT2-201, Transcript of slit guidance ligand 2, humanhuman

TSL 5 BASIC

Gene SLIT2, Length 5,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-201ENST00000273739 DCAF8L2P0C7V8 631 aa22.81■■□□□ 1.24
SLIT2-201ENST00000273739 NISCHQ9Y2I1 1504 aa21.77■■□□□ 1.08
SLIT2-201ENST00000273739 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
SLIT2-201ENST00000273739 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
SLIT2-201ENST00000273739 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
SLIT2-201ENST00000273739 EHMT2Q96KQ7 1210 aa19.87■□□□□ 0.77
SLIT2-201ENST00000273739 APLP2Q06481 763 aa19.74■□□□□ 0.75
SLIT2-201ENST00000273739 ABCC9O60706 1549 aa19.68■□□□□ 0.74
SLIT2-201ENST00000273739 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
SLIT2-201ENST00000273739 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
SLIT2-201ENST00000273739 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.7
SLIT2-201ENST00000273739 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
SLIT2-201ENST00000273739 TTBK1Q5TCY1 1321 aaPredicted RBP19.16■□□□□ 0.66
SLIT2-201ENST00000273739 MYT1LQ9UL68 1186 aa19.14■□□□□ 0.65
SLIT2-201ENST00000273739 UBTFP17480 764 aaKnown RBP19.09■□□□□ 0.65
SLIT2-201ENST00000273739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
SLIT2-201ENST00000273739 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
SLIT2-201ENST00000273739 FBLN2P98095 1184 aa18.81■□□□□ 0.6
SLIT2-201ENST00000273739 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
SLIT2-201ENST00000273739 PELP1Q8IZL8 1130 aaKnown RBP18.52■□□□□ 0.56
SLIT2-201ENST00000273739 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
SLIT2-201ENST00000273739 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
SLIT2-201ENST00000273739 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
SLIT2-201ENST00000273739 ITGAEP38570 1179 aa18.29■□□□□ 0.52
SLIT2-201ENST00000273739 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
SLIT2-201ENST00000273739 ESF1Q9H501 851 aaKnown RBP18.2■□□□□ 0.5
SLIT2-201ENST00000273739 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
SLIT2-201ENST00000273739 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
SLIT2-201ENST00000273739 PPARGC1BQ86YN6 1023 aaKnown RBP18.1■□□□□ 0.49
SLIT2-201ENST00000273739 BCANQ96GW7 911 aa18.08■□□□□ 0.48
SLIT2-201ENST00000273739 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
SLIT2-201ENST00000273739 ZEB1P37275 1124 aaPredicted RBP18.04■□□□□ 0.48
SLIT2-201ENST00000273739 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
SLIT2-201ENST00000273739 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
SLIT2-201ENST00000273739 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
SLIT2-201ENST00000273739 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
SLIT2-201ENST00000273739 POLR3GLQ9BT43 218 aa18.01■□□□□ 0.47
SLIT2-201ENST00000273739 CDK11AQ9UQ88 783 aaPredicted RBP17.98■□□□□ 0.47
SLIT2-201ENST00000273739 FAM50AQ14320 339 aaKnown RBP17.98■□□□□ 0.47
SLIT2-201ENST00000273739 CENPBP07199 599 aaPredicted RBP17.97■□□□□ 0.47
SLIT2-201ENST00000273739 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
SLIT2-201ENST00000273739 NACADO15069 1562 aa17.93■□□□□ 0.46
SLIT2-201ENST00000273739 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
SLIT2-201ENST00000273739 ZNF777Q9ULD5 760 aaPredicted RBP17.87■□□□□ 0.45
SLIT2-201ENST00000273739 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
SLIT2-201ENST00000273739 TRHP20396 242 aaPredicted RBP17.84■□□□□ 0.45
SLIT2-201ENST00000273739 STAG3Q9UJ98 1225 aa17.82■□□□□ 0.44
SLIT2-201ENST00000273739 LOC105371045A0A1W2PR82 267 aa17.74■□□□□ 0.43
SLIT2-201ENST00000273739 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
SLIT2-201ENST00000273739 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
SLIT2-201ENST00000273739 ERICH6Q7L0X2 663 aa17.68■□□□□ 0.42
SLIT2-201ENST00000273739 CNGB1Q14028 1251 aaPredicted RBP17.66■□□□□ 0.42
SLIT2-201ENST00000273739 ARID4BQ4LE39 1312 aaPredicted RBP17.63■□□□□ 0.41
SLIT2-201ENST00000273739 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
SLIT2-201ENST00000273739 ZNF326Q5BKZ1 582 aaKnown RBP17.6■□□□□ 0.41
SLIT2-201ENST00000273739 KCNH8Q96L42 1107 aa17.58■□□□□ 0.4
SLIT2-201ENST00000273739 TRIM26Q12899 539 aaPredicted RBP17.53■□□□□ 0.4
SLIT2-201ENST00000273739 NEFLP07196 543 aa17.52■□□□□ 0.39
SLIT2-201ENST00000273739 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
SLIT2-201ENST00000273739 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
SLIT2-201ENST00000273739 TSPY4P0CV99 314 aa17.45■□□□□ 0.38
SLIT2-201ENST00000273739 TSPY10P0CW01 314 aa17.45■□□□□ 0.38
SLIT2-201ENST00000273739 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
SLIT2-201ENST00000273739 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
SLIT2-201ENST00000273739 CECR2Q9BXF3 1484 aa17.42■□□□□ 0.38
SLIT2-201ENST00000273739 HRCP23327 699 aa17.41■□□□□ 0.38
SLIT2-201ENST00000273739 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
SLIT2-201ENST00000273739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
SLIT2-201ENST00000273739 MYT1Q01538 1121 aa17.38■□□□□ 0.37
SLIT2-201ENST00000273739 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
SLIT2-201ENST00000273739 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
SLIT2-201ENST00000273739 NEFMP07197 916 aa17.36■□□□□ 0.37
SLIT2-201ENST00000273739 PPP1R15AO75807 674 aaPredicted RBP17.35■□□□□ 0.37
SLIT2-201ENST00000273739 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
SLIT2-201ENST00000273739 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
SLIT2-201ENST00000273739 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.36
SLIT2-201ENST00000273739 HAP1P54257 671 aaPredicted RBP17.21■□□□□ 0.35
SLIT2-201ENST00000273739 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.34
SLIT2-201ENST00000273739 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
SLIT2-201ENST00000273739 A0A0G2JS52 829 aa17.19■□□□□ 0.34
SLIT2-201ENST00000273739 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
SLIT2-201ENST00000273739 SMARCA2P51531 1590 aa17.18■□□□□ 0.34
SLIT2-201ENST00000273739 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
SLIT2-201ENST00000273739 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
SLIT2-201ENST00000273739 MLECQ14165 292 aa17.14■□□□□ 0.33
SLIT2-201ENST00000273739 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
SLIT2-201ENST00000273739 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
SLIT2-201ENST00000273739 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
SLIT2-201ENST00000273739 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
SLIT2-201ENST00000273739 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
SLIT2-201ENST00000273739 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
SLIT2-201ENST00000273739 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
SLIT2-201ENST00000273739 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
SLIT2-201ENST00000273739 CARMIL2Q6F5E8 1435 aa17.05■□□□□ 0.32
SLIT2-201ENST00000273739 NPM2Q86SE8 214 aaKnown RBP17.01■□□□□ 0.31
SLIT2-201ENST00000273739 CUX2O14529 1486 aa17.01■□□□□ 0.31
SLIT2-201ENST00000273739 CADPSQ9ULU8 1353 aa17■□□□□ 0.31
SLIT2-201ENST00000273739 SOGA1O94964 1423 aa17■□□□□ 0.31
SLIT2-201ENST00000273739 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
SLIT2-201ENST00000273739 HDGFP51858 240 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms