RNA–Protein interactions for RNA: ENST00000618266.4

NCAM1-225, Transcript of neural cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCAM1, Length 5,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-225ENST00000618266 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
NCAM1-225ENST00000618266 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
NCAM1-225ENST00000618266 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
NCAM1-225ENST00000618266 APLP2Q06481 763 aa18.62■□□□□ 0.57
NCAM1-225ENST00000618266 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
NCAM1-225ENST00000618266 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
NCAM1-225ENST00000618266 ERICH6Q7L0X2 663 aa18.17■□□□□ 0.5
NCAM1-225ENST00000618266 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
NCAM1-225ENST00000618266 SHROOM4Q9ULL8 1493 aa17.79■□□□□ 0.44
NCAM1-225ENST00000618266 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
NCAM1-225ENST00000618266 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
NCAM1-225ENST00000618266 NEFLP07196 543 aa17.71■□□□□ 0.42
NCAM1-225ENST00000618266 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
NCAM1-225ENST00000618266 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
NCAM1-225ENST00000618266 TTBK1Q5TCY1 1321 aaPredicted RBP17.49■□□□□ 0.39
NCAM1-225ENST00000618266 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
NCAM1-225ENST00000618266 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
NCAM1-225ENST00000618266 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.39
NCAM1-225ENST00000618266 MYT1LQ9UL68 1186 aa17.44■□□□□ 0.38
NCAM1-225ENST00000618266 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.38
NCAM1-225ENST00000618266 MYT1Q01538 1121 aa17.37■□□□□ 0.37
NCAM1-225ENST00000618266 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
NCAM1-225ENST00000618266 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
NCAM1-225ENST00000618266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
NCAM1-225ENST00000618266 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
NCAM1-225ENST00000618266 POLR3GLQ9BT43 218 aa17.03■□□□□ 0.32
NCAM1-225ENST00000618266 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
NCAM1-225ENST00000618266 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
NCAM1-225ENST00000618266 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
NCAM1-225ENST00000618266 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
NCAM1-225ENST00000618266 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
NCAM1-225ENST00000618266 RTL5Q5HYW3 569 aaPredicted RBP16.83■□□□□ 0.28
NCAM1-225ENST00000618266 ITGAEP38570 1179 aa16.73■□□□□ 0.27
NCAM1-225ENST00000618266 NEFMP07197 916 aa16.66■□□□□ 0.26
NCAM1-225ENST00000618266 CNGB1Q14028 1251 aaPredicted RBP16.59■□□□□ 0.25
NCAM1-225ENST00000618266 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
NCAM1-225ENST00000618266 SLC24A1O60721 1099 aa16.52■□□□□ 0.23
NCAM1-225ENST00000618266 BCANQ96GW7 911 aa16.47■□□□□ 0.23
NCAM1-225ENST00000618266 TRIM52Q96A61 297 aa16.46■□□□□ 0.23
NCAM1-225ENST00000618266 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
NCAM1-225ENST00000618266 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
NCAM1-225ENST00000618266 ESF1Q9H501 851 aaKnown RBP16.4■□□□□ 0.22
NCAM1-225ENST00000618266 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
NCAM1-225ENST00000618266 ANP32BQ92688 251 aaKnown RBP16.28■□□□□ 0.2
NCAM1-225ENST00000618266 HRCP23327 699 aa16.27■□□□□ 0.2
NCAM1-225ENST00000618266 ANP32CO43423 234 aa16.24■□□□□ 0.19
NCAM1-225ENST00000618266 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
NCAM1-225ENST00000618266 ZNF326Q5BKZ1 582 aaKnown RBP16.23■□□□□ 0.19
NCAM1-225ENST00000618266 CDK11BP21127 795 aaKnown RBP16.21■□□□□ 0.19
NCAM1-225ENST00000618266 FBLN2P98095 1184 aa16.18■□□□□ 0.18
NCAM1-225ENST00000618266 BCL11AQ9H165 835 aa16.15■□□□□ 0.18
NCAM1-225ENST00000618266 STAG3Q9UJ98 1225 aa16.15■□□□□ 0.18
NCAM1-225ENST00000618266 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
NCAM1-225ENST00000618266 HSP90AA1P07900 732 aaKnown RBP16.1■□□□□ 0.17
NCAM1-225ENST00000618266 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
NCAM1-225ENST00000618266 NPM2Q86SE8 214 aaKnown RBP16.08■□□□□ 0.16
NCAM1-225ENST00000618266 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.16
NCAM1-225ENST00000618266 ANP32AP39687 249 aaKnown RBP16.07■□□□□ 0.16
NCAM1-225ENST00000618266 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
NCAM1-225ENST00000618266 CHGAP10645 457 aaKnown RBP15.91■□□□□ 0.14
NCAM1-225ENST00000618266 GLIPR1L2Q4G1C9 344 aa15.89■□□□□ 0.13
NCAM1-225ENST00000618266 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
NCAM1-225ENST00000618266 ZNF777Q9ULD5 760 aaPredicted RBP15.87■□□□□ 0.13
NCAM1-225ENST00000618266 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.12
NCAM1-225ENST00000618266 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
NCAM1-225ENST00000618266 A0A0G2JS52 829 aa15.81■□□□□ 0.12
NCAM1-225ENST00000618266 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
NCAM1-225ENST00000618266 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
NCAM1-225ENST00000618266 EIF5BO60841 1220 aaKnown RBP15.74■□□□□ 0.11
NCAM1-225ENST00000618266 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
NCAM1-225ENST00000618266 NCLP19338 710 aaKnown RBP15.72■□□□□ 0.11
NCAM1-225ENST00000618266 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
NCAM1-225ENST00000618266 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
NCAM1-225ENST00000618266 ZRSR1Q15695 479 aaKnown RBP15.69■□□□□ 0.1
NCAM1-225ENST00000618266 TONSLQ96HA7 1378 aa15.67■□□□□ 0.1
NCAM1-225ENST00000618266 ARID3CA6NKF2 412 aa15.67■□□□□ 0.1
NCAM1-225ENST00000618266 C14orf37Q86TY3 774 aa15.67■□□□□ 0.1
NCAM1-225ENST00000618266 ANP32EQ9BTT0 268 aa15.65■□□□□ 0.1
NCAM1-225ENST00000618266 PPP1R15AO75807 674 aaPredicted RBP15.63■□□□□ 0.09
NCAM1-225ENST00000618266 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
NCAM1-225ENST00000618266 TSPY4P0CV99 314 aa15.61■□□□□ 0.09
NCAM1-225ENST00000618266 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
NCAM1-225ENST00000618266 GOLGA6L22H0YM25 854 aa15.6■□□□□ 0.09
NCAM1-225ENST00000618266 TMC1Q8TDI8 760 aa15.59■□□□□ 0.09
NCAM1-225ENST00000618266 ACIN1Q9UKV3 1341 aaKnown RBP15.58■□□□□ 0.08
NCAM1-225ENST00000618266 GTF3C3Q9Y5Q9 886 aa15.57■□□□□ 0.08
NCAM1-225ENST00000618266 ZBTB7CA1YPR0 619 aa15.56■□□□□ 0.08
NCAM1-225ENST00000618266 NPHP1O15259 732 aa15.55■□□□□ 0.08
NCAM1-225ENST00000618266 CASC1Q6TDU7 716 aa15.54■□□□□ 0.08
NCAM1-225ENST00000618266 ABCC9O60706 1549 aa15.54■□□□□ 0.08
NCAM1-225ENST00000618266 BECN1Q14457 450 aa15.53■□□□□ 0.08
NCAM1-225ENST00000618266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
NCAM1-225ENST00000618266 CCDC136Q96JN2 1154 aa15.52■□□□□ 0.07
NCAM1-225ENST00000618266 TNNT2P45379 298 aaPredicted RBP15.51■□□□□ 0.07
NCAM1-225ENST00000618266 CFAP53Q96M91 514 aa15.5■□□□□ 0.07
NCAM1-225ENST00000618266 EIF4G2P78344 907 aaKnown RBP eCLIP15.5■□□□□ 0.07
NCAM1-225ENST00000618266 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
NCAM1-225ENST00000618266 HNRNPUQ00839 825 aaKnown RBP eCLIP15.49■□□□□ 0.07
NCAM1-225ENST00000618266 ARXQ96QS3 562 aa15.49■□□□□ 0.07
NCAM1-225ENST00000618266 GOLGA6L6A8MZA4 724 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms