Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 AC011270.2-201ENST00000624293 2550 ntBASIC19.78■□□□□ 0.76
CHD2O14647 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.78■□□□□ 0.76
CHD2O14647 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CHD2O14647 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC19.78■□□□□ 0.76
CHD2O14647 AL121949.3-201ENST00000406684 385 ntBASIC19.78■□□□□ 0.76
CHD2O14647 AC098657.1-201ENST00000416270 1135 ntBASIC19.78■□□□□ 0.76
CHD2O14647 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC19.78■□□□□ 0.76
CHD2O14647 TREX1-203ENST00000456089 629 ntTSL 3 BASIC19.78■□□□□ 0.76
CHD2O14647 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC19.78■□□□□ 0.76
CHD2O14647 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD2O14647 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC19.78■□□□□ 0.76
CHD2O14647 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 RN7SL602P-201ENST00000578326 324 ntBASIC19.78■□□□□ 0.76
CHD2O14647 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC19.78■□□□□ 0.76
CHD2O14647 RN7SL718P-201ENST00000581254 303 ntBASIC19.78■□□□□ 0.76
CHD2O14647 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 AC113385.2-201ENST00000614465 762 ntBASIC19.78■□□□□ 0.76
CHD2O14647 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CHD2O14647 AC092115.1-201ENST00000566277 1402 ntBASIC19.78■□□□□ 0.76
CHD2O14647 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.78■□□□□ 0.76
CHD2O14647 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHD2O14647 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.77■□□□□ 0.76
CHD2O14647 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC19.77■□□□□ 0.76
CHD2O14647 FAM226B-201ENST00000602508 1490 ntBASIC19.77■□□□□ 0.76
CHD2O14647 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC19.77■□□□□ 0.76
CHD2O14647 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC19.77■□□□□ 0.76
CHD2O14647 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC19.77■□□□□ 0.76
CHD2O14647 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHD2O14647 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC19.77■□□□□ 0.76
CHD2O14647 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC19.77■□□□□ 0.76
CHD2O14647 AL049840.2-201ENST00000602722 535 ntBASIC19.77■□□□□ 0.76
CHD2O14647 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHD2O14647 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD2O14647 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD2O14647 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.77■□□□□ 0.76
CHD2O14647 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD2O14647 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC19.77■□□□□ 0.76
CHD2O14647 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHD2O14647 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC19.77■□□□□ 0.75
CHD2O14647 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CHD2O14647 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHD2O14647 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC19.76■□□□□ 0.75
CHD2O14647 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD2O14647 MIR4254-201ENST00000581063 76 ntBASIC19.76■□□□□ 0.75
CHD2O14647 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC19.76■□□□□ 0.75
CHD2O14647 AC004466.2-201ENST00000614749 516 ntBASIC19.76■□□□□ 0.75
CHD2O14647 AC005746.3-201ENST00000614751 393 ntBASIC19.76■□□□□ 0.75
CHD2O14647 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC19.76■□□□□ 0.75
CHD2O14647 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHD2O14647 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHD2O14647 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC19.76■□□□□ 0.75
CHD2O14647 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CHD2O14647 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.76■□□□□ 0.75
CHD2O14647 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD2O14647 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHD2O14647 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD2O14647 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC19.76■□□□□ 0.75
CHD2O14647 CDK4P1-201ENST00000454213 828 ntBASIC19.76■□□□□ 0.75
CHD2O14647 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD2O14647 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC19.76■□□□□ 0.75
CHD2O14647 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD2O14647 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC19.76■□□□□ 0.75
CHD2O14647 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC19.76■□□□□ 0.75
CHD2O14647 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC19.76■□□□□ 0.75
CHD2O14647 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD2O14647 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHD2O14647 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD2O14647 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.75■□□□□ 0.75
CHD2O14647 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CHD2O14647 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD2O14647 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms