RNA–Protein interactions for RNA: ENST00000581063.1

MIR4254-201, Transcript of microRNA 4254, humanhuman

BASIC

Gene MIR4254, Length 76 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4254-201ENST00000581063 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
MIR4254-201ENST00000581063 ABCC9O60706 1549 aa29.21■■■□□ 2.27
MIR4254-201ENST00000581063 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
MIR4254-201ENST00000581063 RB1CC1Q8TDY2 1594 aa27.74■■■□□ 2.03
MIR4254-201ENST00000581063 NACADO15069 1562 aa27.52■■■□□ 2
MIR4254-201ENST00000581063 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
MIR4254-201ENST00000581063 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.98
MIR4254-201ENST00000581063 PABPN1Q86U42 306 aaKnown RBP eCLIP27.2■■□□□ 1.94
MIR4254-201ENST00000581063 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
MIR4254-201ENST00000581063 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
MIR4254-201ENST00000581063 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
MIR4254-201ENST00000581063 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
MIR4254-201ENST00000581063 DCAF1Q9Y4B6 1507 aa26.73■■□□□ 1.87
MIR4254-201ENST00000581063 SCRIBQ14160 1630 aa26.55■■□□□ 1.84
MIR4254-201ENST00000581063 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
MIR4254-201ENST00000581063 CC2D2AQ9P2K1 1620 aa26.33■■□□□ 1.81
MIR4254-201ENST00000581063 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
MIR4254-201ENST00000581063 EIF4G1Q04637 1599 aaKnown RBP26.27■■□□□ 1.8
MIR4254-201ENST00000581063 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
MIR4254-201ENST00000581063 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
MIR4254-201ENST00000581063 SMARCA4P51532 1647 aa25.29■■□□□ 1.64
MIR4254-201ENST00000581063 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
MIR4254-201ENST00000581063 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
MIR4254-201ENST00000581063 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
MIR4254-201ENST00000581063 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
MIR4254-201ENST00000581063 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
MIR4254-201ENST00000581063 CUX2O14529 1486 aa25.15■■□□□ 1.62
MIR4254-201ENST00000581063 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
MIR4254-201ENST00000581063 NESP48681 1621 aa25.05■■□□□ 1.6
MIR4254-201ENST00000581063 PEG3Q9GZU2 1588 aa25.01■■□□□ 1.59
MIR4254-201ENST00000581063 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
MIR4254-201ENST00000581063 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
MIR4254-201ENST00000581063 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
MIR4254-201ENST00000581063 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
MIR4254-201ENST00000581063 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
MIR4254-201ENST00000581063 WIZO95785 1651 aa24.66■■□□□ 1.54
MIR4254-201ENST00000581063 CADPSQ9ULU8 1353 aa24.66■■□□□ 1.54
MIR4254-201ENST00000581063 MRC2Q9UBG0 1479 aa24.53■■□□□ 1.52
MIR4254-201ENST00000581063 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
MIR4254-201ENST00000581063 WDR62O43379 1518 aa24.44■■□□□ 1.5
MIR4254-201ENST00000581063 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
MIR4254-201ENST00000581063 FANCD2Q9BXW9 1451 aa24.39■■□□□ 1.5
MIR4254-201ENST00000581063 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
MIR4254-201ENST00000581063 CFTRP13569 1480 aa24.35■■□□□ 1.49
MIR4254-201ENST00000581063 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
MIR4254-201ENST00000581063 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
MIR4254-201ENST00000581063 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
MIR4254-201ENST00000581063 OSCARQ8IYS5 282 aa24.04■■□□□ 1.44
MIR4254-201ENST00000581063 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
MIR4254-201ENST00000581063 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
MIR4254-201ENST00000581063 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
MIR4254-201ENST00000581063 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.41
MIR4254-201ENST00000581063 ABCC8Q09428 1581 aa23.85■■□□□ 1.41
MIR4254-201ENST00000581063 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
MIR4254-201ENST00000581063 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
MIR4254-201ENST00000581063 RIMBP3CA6NJZ7 1639 aa23.69■■□□□ 1.38
MIR4254-201ENST00000581063 RIMBP3BA6NNM3 1639 aa23.69■■□□□ 1.38
MIR4254-201ENST00000581063 RIMBP3Q9UFD9 1639 aa23.69■■□□□ 1.38
MIR4254-201ENST00000581063 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
MIR4254-201ENST00000581063 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
MIR4254-201ENST00000581063 TARBP1Q13395 1621 aaKnown RBP23.66■■□□□ 1.38
MIR4254-201ENST00000581063 ARHGEF11O15085 1522 aa23.63■■□□□ 1.37
MIR4254-201ENST00000581063 FBLN2P98095 1184 aa23.62■■□□□ 1.37
MIR4254-201ENST00000581063 RAD54L2Q9Y4B4 1467 aa23.59■■□□□ 1.37
MIR4254-201ENST00000581063 SOGA1O94964 1423 aa23.58■■□□□ 1.36
MIR4254-201ENST00000581063 CHD1O14646 1710 aa23.56■■□□□ 1.36
MIR4254-201ENST00000581063 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
MIR4254-201ENST00000581063 FGD5Q6ZNL6 1462 aa23.52■■□□□ 1.36
MIR4254-201ENST00000581063 CYB5RLQ6IPT4 315 aa23.51■■□□□ 1.35
MIR4254-201ENST00000581063 CUX1P39880 1505 aa23.47■■□□□ 1.35
MIR4254-201ENST00000581063 SNAPC4Q5SXM2 1469 aa23.45■■□□□ 1.34
MIR4254-201ENST00000581063 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
MIR4254-201ENST00000581063 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
MIR4254-201ENST00000581063 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
MIR4254-201ENST00000581063 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
MIR4254-201ENST00000581063 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
MIR4254-201ENST00000581063 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
MIR4254-201ENST00000581063 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
MIR4254-201ENST00000581063 TRHP20396 242 aaPredicted RBP23.31■■□□□ 1.32
MIR4254-201ENST00000581063 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
MIR4254-201ENST00000581063 CLASP1Q7Z460 1538 aa23.29■■□□□ 1.32
MIR4254-201ENST00000581063 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
MIR4254-201ENST00000581063 PBRM1Q86U86 1689 aa23.23■■□□□ 1.31
MIR4254-201ENST00000581063 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
MIR4254-201ENST00000581063 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
MIR4254-201ENST00000581063 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
MIR4254-201ENST00000581063 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
MIR4254-201ENST00000581063 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
MIR4254-201ENST00000581063 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
MIR4254-201ENST00000581063 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
MIR4254-201ENST00000581063 FHAD1B1AJZ9 1412 aa22.98■■□□□ 1.27
MIR4254-201ENST00000581063 NUP160Q12769 1436 aa22.97■■□□□ 1.27
MIR4254-201ENST00000581063 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
MIR4254-201ENST00000581063 ERCC6L2Q5T890 1561 aa22.94■■□□□ 1.26
MIR4254-201ENST00000581063 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
MIR4254-201ENST00000581063 SHROOM2Q13796 1616 aa22.84■■□□□ 1.25
MIR4254-201ENST00000581063 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
MIR4254-201ENST00000581063 JPH4Q96JJ6 628 aa22.76■■□□□ 1.23
MIR4254-201ENST00000581063 RUSC2Q8N2Y8 1516 aa22.71■■□□□ 1.23
MIR4254-201ENST00000581063 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms