RNA–Protein interactions for RNA: ENST00000527161.5

LINC00301-203, long intergenic non-protein coding RNA 301, humanhuman

TSL 2 BASIC

Gene LINC00301, Length 749 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301-203ENST00000527161 NISCHQ9Y2I1 1504 aa32.61■■■□□ 2.81
LINC00301-203ENST00000527161 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
LINC00301-203ENST00000527161 ABCC9O60706 1549 aa28.66■■■□□ 2.18
LINC00301-203ENST00000527161 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
LINC00301-203ENST00000527161 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
LINC00301-203ENST00000527161 NACADO15069 1562 aa27.42■■□□□ 1.98
LINC00301-203ENST00000527161 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
LINC00301-203ENST00000527161 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
LINC00301-203ENST00000527161 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
LINC00301-203ENST00000527161 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.87
LINC00301-203ENST00000527161 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.87
LINC00301-203ENST00000527161 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
LINC00301-203ENST00000527161 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
LINC00301-203ENST00000527161 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
LINC00301-203ENST00000527161 DNAJC5BQ9UF47 199 aa26.35■■□□□ 1.81
LINC00301-203ENST00000527161 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
LINC00301-203ENST00000527161 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
LINC00301-203ENST00000527161 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
LINC00301-203ENST00000527161 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
LINC00301-203ENST00000527161 BAZ1AQ9NRL2 1556 aaPredicted RBP25.34■■□□□ 1.65
LINC00301-203ENST00000527161 SMARCA2P51531 1590 aa25.28■■□□□ 1.64
LINC00301-203ENST00000527161 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
LINC00301-203ENST00000527161 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
LINC00301-203ENST00000527161 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
LINC00301-203ENST00000527161 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
LINC00301-203ENST00000527161 MROH2BQ7Z745 1585 aa25.1■■□□□ 1.61
LINC00301-203ENST00000527161 PEG3Q9GZU2 1588 aa25.07■■□□□ 1.6
LINC00301-203ENST00000527161 WIZO95785 1651 aa24.82■■□□□ 1.56
LINC00301-203ENST00000527161 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
LINC00301-203ENST00000527161 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
LINC00301-203ENST00000527161 NESP48681 1621 aa24.69■■□□□ 1.54
LINC00301-203ENST00000527161 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
LINC00301-203ENST00000527161 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
LINC00301-203ENST00000527161 PDS5BQ9NTI5 1447 aa24.57■■□□□ 1.52
LINC00301-203ENST00000527161 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
LINC00301-203ENST00000527161 CUX2O14529 1486 aa24.56■■□□□ 1.52
LINC00301-203ENST00000527161 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
LINC00301-203ENST00000527161 THOC2Q8NI27 1593 aaKnown RBP24.36■■□□□ 1.49
LINC00301-203ENST00000527161 CFTRP13569 1480 aa24.34■■□□□ 1.49
LINC00301-203ENST00000527161 CEP164Q9UPV0 1460 aa24.31■■□□□ 1.48
LINC00301-203ENST00000527161 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
LINC00301-203ENST00000527161 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
LINC00301-203ENST00000527161 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
LINC00301-203ENST00000527161 WDR62O43379 1518 aa24.17■■□□□ 1.46
LINC00301-203ENST00000527161 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
LINC00301-203ENST00000527161 SUPT5HO00267 1087 aaKnown RBP24.11■■□□□ 1.45
LINC00301-203ENST00000527161 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
LINC00301-203ENST00000527161 DNAJC5Q9H3Z4 198 aa23.98■■□□□ 1.43
LINC00301-203ENST00000527161 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
LINC00301-203ENST00000527161 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
LINC00301-203ENST00000527161 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
LINC00301-203ENST00000527161 IFT140Q96RY7 1462 aa23.8■■□□□ 1.4
LINC00301-203ENST00000527161 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
LINC00301-203ENST00000527161 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
LINC00301-203ENST00000527161 SOGA1O94964 1423 aa23.58■■□□□ 1.36
LINC00301-203ENST00000527161 CUX1P39880 1505 aa23.57■■□□□ 1.36
LINC00301-203ENST00000527161 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
LINC00301-203ENST00000527161 EIF4G3O43432 1585 aaKnown RBP23.56■■□□□ 1.36
LINC00301-203ENST00000527161 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
LINC00301-203ENST00000527161 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
LINC00301-203ENST00000527161 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
LINC00301-203ENST00000527161 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.35
LINC00301-203ENST00000527161 WDR97A6NE52 1622 aa23.45■■□□□ 1.34
LINC00301-203ENST00000527161 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
LINC00301-203ENST00000527161 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
LINC00301-203ENST00000527161 FBLN2P98095 1184 aa23.38■■□□□ 1.33
LINC00301-203ENST00000527161 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
LINC00301-203ENST00000527161 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
LINC00301-203ENST00000527161 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.32
LINC00301-203ENST00000527161 ABCA10Q8WWZ4 1543 aa23.32■■□□□ 1.32
LINC00301-203ENST00000527161 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
LINC00301-203ENST00000527161 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
LINC00301-203ENST00000527161 SYNJ1O43426 1573 aa23.29■■□□□ 1.32
LINC00301-203ENST00000527161 MAGI1Q96QZ7 1491 aaPredicted RBP23.29■■□□□ 1.32
LINC00301-203ENST00000527161 CHD1O14646 1710 aa23.28■■□□□ 1.32
LINC00301-203ENST00000527161 CHMP7Q8WUX9 453 aaPredicted RBP23.27■■□□□ 1.32
LINC00301-203ENST00000527161 PBRM1Q86U86 1689 aa23.22■■□□□ 1.31
LINC00301-203ENST00000527161 TRIM41Q8WV44 630 aa23.21■■□□□ 1.31
LINC00301-203ENST00000527161 ABCA5Q8WWZ7 1642 aa23.21■■□□□ 1.31
LINC00301-203ENST00000527161 SYNJ2O15056 1496 aa23.19■■□□□ 1.3
LINC00301-203ENST00000527161 RIMBP3CA6NJZ7 1639 aa23.1■■□□□ 1.29
LINC00301-203ENST00000527161 RIMBP3BA6NNM3 1639 aa23.1■■□□□ 1.29
LINC00301-203ENST00000527161 RIMBP3Q9UFD9 1639 aa23.1■■□□□ 1.29
LINC00301-203ENST00000527161 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
LINC00301-203ENST00000527161 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
LINC00301-203ENST00000527161 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
LINC00301-203ENST00000527161 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
LINC00301-203ENST00000527161 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
LINC00301-203ENST00000527161 GRIN2AQ12879 1464 aa23■■□□□ 1.27
LINC00301-203ENST00000527161 KIF27Q86VH2 1401 aa22.99■■□□□ 1.27
LINC00301-203ENST00000527161 CYB5RLQ6IPT4 315 aa22.94■■□□□ 1.26
LINC00301-203ENST00000527161 NUP160Q12769 1436 aa22.88■■□□□ 1.25
LINC00301-203ENST00000527161 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
LINC00301-203ENST00000527161 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
LINC00301-203ENST00000527161 CUL7Q14999 1698 aa22.83■■□□□ 1.24
LINC00301-203ENST00000527161 IGF1RP08069 1367 aa22.82■■□□□ 1.24
LINC00301-203ENST00000527161 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
LINC00301-203ENST00000527161 JPH4Q96JJ6 628 aa22.7■■□□□ 1.22
LINC00301-203ENST00000527161 SHROOM2Q13796 1616 aa22.7■■□□□ 1.22
LINC00301-203ENST00000527161 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms