Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 AL445209.1-201ENST00000607269 3491 ntBASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 AC005332.1-201ENST00000577698 1310 ntBASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 AC009474.1-201ENST00000455096 1565 ntBASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 KRT18P27-201ENST00000427733 1299 ntBASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SART3-203ENST00000546611 1184 ntBASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 AC073389.1-201ENST00000595595 795 ntBASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 Z98257.2-202ENST00000641138 1548 ntBASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 AP3S2-216ENST00000617003 1561 ntBASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC9.38□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms