RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
LAMA4-207ENST00000424408 PELP1Q8IZL8 1130 aaKnown RBP19.68■□□□□ 0.74
LAMA4-207ENST00000424408 SUPT5HO00267 1087 aaKnown RBP19.44■□□□□ 0.7
LAMA4-207ENST00000424408 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
LAMA4-207ENST00000424408 ERICH6Q7L0X2 663 aa19.02■□□□□ 0.64
LAMA4-207ENST00000424408 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
LAMA4-207ENST00000424408 MYT1Q01538 1121 aa18.82■□□□□ 0.6
LAMA4-207ENST00000424408 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
LAMA4-207ENST00000424408 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.59
LAMA4-207ENST00000424408 PCGF6Q9BYE7 350 aa18.74■□□□□ 0.59
LAMA4-207ENST00000424408 APLP2Q06481 763 aa18.71■□□□□ 0.59
LAMA4-207ENST00000424408 TTBK1Q5TCY1 1321 aaPredicted RBP18.6■□□□□ 0.57
LAMA4-207ENST00000424408 ZEB1P37275 1124 aaPredicted RBP18.49■□□□□ 0.55
LAMA4-207ENST00000424408 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
LAMA4-207ENST00000424408 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
LAMA4-207ENST00000424408 NISCHQ9Y2I1 1504 aa18.4■□□□□ 0.54
LAMA4-207ENST00000424408 NEFLP07196 543 aa18.36■□□□□ 0.53
LAMA4-207ENST00000424408 RANGAP1P46060 587 aaPredicted RBP18.11■□□□□ 0.49
LAMA4-207ENST00000424408 DAXXQ9UER7 740 aaPredicted RBP17.96■□□□□ 0.47
LAMA4-207ENST00000424408 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
LAMA4-207ENST00000424408 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
LAMA4-207ENST00000424408 HRCP23327 699 aa17.81■□□□□ 0.44
LAMA4-207ENST00000424408 PPARGC1BQ86YN6 1023 aaKnown RBP17.79■□□□□ 0.44
LAMA4-207ENST00000424408 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
LAMA4-207ENST00000424408 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
LAMA4-207ENST00000424408 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
LAMA4-207ENST00000424408 POLR3GLQ9BT43 218 aa17.57■□□□□ 0.4
LAMA4-207ENST00000424408 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
LAMA4-207ENST00000424408 CNGB1Q14028 1251 aaPredicted RBP17.46■□□□□ 0.39
LAMA4-207ENST00000424408 ITGAEP38570 1179 aa17.43■□□□□ 0.38
LAMA4-207ENST00000424408 DIEXFQ68CQ4 756 aaKnown RBP17.4■□□□□ 0.38
LAMA4-207ENST00000424408 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
LAMA4-207ENST00000424408 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
LAMA4-207ENST00000424408 GTF3C3Q9Y5Q9 886 aa17.33■□□□□ 0.37
LAMA4-207ENST00000424408 BCANQ96GW7 911 aa17.33■□□□□ 0.36
LAMA4-207ENST00000424408 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
LAMA4-207ENST00000424408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
LAMA4-207ENST00000424408 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
LAMA4-207ENST00000424408 MYT1LQ9UL68 1186 aa17.14■□□□□ 0.33
LAMA4-207ENST00000424408 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
LAMA4-207ENST00000424408 EIF5BO60841 1220 aaKnown RBP17.03■□□□□ 0.32
LAMA4-207ENST00000424408 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
LAMA4-207ENST00000424408 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
LAMA4-207ENST00000424408 ANP32CO43423 234 aa16.94■□□□□ 0.3
LAMA4-207ENST00000424408 ANP32AP39687 249 aaKnown RBP16.93■□□□□ 0.3
LAMA4-207ENST00000424408 NEUROD1Q13562 356 aa16.92■□□□□ 0.3
LAMA4-207ENST00000424408 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
LAMA4-207ENST00000424408 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
LAMA4-207ENST00000424408 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
LAMA4-207ENST00000424408 GLIPR1L2Q4G1C9 344 aa16.84■□□□□ 0.29
LAMA4-207ENST00000424408 TRIM52Q96A61 297 aa16.83■□□□□ 0.28
LAMA4-207ENST00000424408 BCL11AQ9H165 835 aa16.81■□□□□ 0.28
LAMA4-207ENST00000424408 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
LAMA4-207ENST00000424408 ANP32BQ92688 251 aaKnown RBP16.73■□□□□ 0.27
LAMA4-207ENST00000424408 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
LAMA4-207ENST00000424408 FKBP8Q14318 412 aa16.7■□□□□ 0.26
LAMA4-207ENST00000424408 NBR1Q14596 966 aa16.66■□□□□ 0.26
LAMA4-207ENST00000424408 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
LAMA4-207ENST00000424408 HSP90AA1P07900 732 aaKnown RBP16.56■□□□□ 0.24
LAMA4-207ENST00000424408 ARXQ96QS3 562 aa16.53■□□□□ 0.24
LAMA4-207ENST00000424408 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
LAMA4-207ENST00000424408 NEFMP07197 916 aa16.47■□□□□ 0.23
LAMA4-207ENST00000424408 SCAF1Q9H7N4 1312 aaKnown RBP16.46■□□□□ 0.23
LAMA4-207ENST00000424408 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
LAMA4-207ENST00000424408 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
LAMA4-207ENST00000424408 FAM9BQ8IZU0 186 aa16.37■□□□□ 0.21
LAMA4-207ENST00000424408 DDX10Q13206 875 aaKnown RBP16.3■□□□□ 0.2
LAMA4-207ENST00000424408 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
LAMA4-207ENST00000424408 ANP32EQ9BTT0 268 aa16.28■□□□□ 0.2
LAMA4-207ENST00000424408 IRX6P78412 446 aaPredicted RBP16.28■□□□□ 0.2
LAMA4-207ENST00000424408 TRIM44Q96DX7 344 aaPredicted RBP16.23■□□□□ 0.19
LAMA4-207ENST00000424408 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.22■□□□□ 0.19
LAMA4-207ENST00000424408 TNNT2P45379 298 aaPredicted RBP16.21■□□□□ 0.19
LAMA4-207ENST00000424408 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
LAMA4-207ENST00000424408 DDRGK1Q96HY6 314 aa16.18■□□□□ 0.18
LAMA4-207ENST00000424408 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
LAMA4-207ENST00000424408 MIER1Q8N108 512 aa16.16■□□□□ 0.18
LAMA4-207ENST00000424408 P3H3Q8IVL6 736 aa16.16■□□□□ 0.18
LAMA4-207ENST00000424408 ARID3CA6NKF2 412 aa16.15■□□□□ 0.18
LAMA4-207ENST00000424408 TMC1Q8TDI8 760 aa16.14■□□□□ 0.17
LAMA4-207ENST00000424408 NAP1L5Q96NT1 182 aaPredicted RBP16.12■□□□□ 0.17
LAMA4-207ENST00000424408 BECN1Q14457 450 aa16.12■□□□□ 0.17
LAMA4-207ENST00000424408 ZNF777Q9ULD5 760 aaPredicted RBP16.1■□□□□ 0.17
LAMA4-207ENST00000424408 MRS2Q9HD23 443 aa16.1■□□□□ 0.17
LAMA4-207ENST00000424408 WDR43Q15061 677 aaKnown RBP eCLIP16.07■□□□□ 0.16
LAMA4-207ENST00000424408 NCLP19338 710 aaKnown RBP16.07■□□□□ 0.16
LAMA4-207ENST00000424408 ERICH6BQ5W0A0 696 aa16.05■□□□□ 0.16
LAMA4-207ENST00000424408 PTMAP06454 111 aaKnown RBP16.05■□□□□ 0.16
LAMA4-207ENST00000424408 CDK11BP21127 795 aaKnown RBP16.04■□□□□ 0.16
LAMA4-207ENST00000424408 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
LAMA4-207ENST00000424408 DNTTIP2Q5QJE6 756 aaKnown RBP16.04■□□□□ 0.16
LAMA4-207ENST00000424408 GOLGA6L22H0YM25 854 aa16.03■□□□□ 0.16
LAMA4-207ENST00000424408 FBLN2P98095 1184 aa16.02■□□□□ 0.16
LAMA4-207ENST00000424408 LAS1LQ9Y4W2 734 aaKnown RBP16.01■□□□□ 0.15
LAMA4-207ENST00000424408 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
LAMA4-207ENST00000424408 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
LAMA4-207ENST00000424408 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
LAMA4-207ENST00000424408 CHGAP10645 457 aaKnown RBP15.97■□□□□ 0.15
LAMA4-207ENST00000424408 HIRIP3Q9BW71 556 aaPredicted RBP15.97■□□□□ 0.15
LAMA4-207ENST00000424408 NOP58Q9Y2X3 529 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms